RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 MAFO75444 373 aaPredicted RBP13.27□□□□□ -0.29
LTBP3-219ENST00000530990 BAIAP3O94812 1187 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 RPA1P27694 616 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 WDR5P61964 334 aaKnown RBP13.27□□□□□ -0.29
LTBP3-219ENST00000530990 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.29
LTBP3-219ENST00000530990 EMC2Q15006 297 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 KIZQ2M2Z5 673 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 XKR9Q5GH70 373 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 FOXD4L5Q5VV16 416 aaPredicted RBP13.27□□□□□ -0.29
LTBP3-219ENST00000530990 ARL6IP4Q66PJ3 421 aaKnown RBP13.27□□□□□ -0.29
LTBP3-219ENST00000530990 TSHZ1Q6ZSZ6 1077 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 NME8Q8N427 588 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 SNX29Q8TEQ0 813 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 PIGOQ8TEQ8 1089 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 TMEM40Q8WWA1 233 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 FOXD4L4Q8WXT5 416 aaPredicted RBP13.27□□□□□ -0.29
LTBP3-219ENST00000530990 OSMRQ99650 979 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 IFIH1Q9BYX4 1025 aaKnown RBP13.27□□□□□ -0.29
LTBP3-219ENST00000530990 RAB34Q9BZG1 259 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 ZSCAN16Q9H4T2 348 aaPredicted RBP13.27□□□□□ -0.29
LTBP3-219ENST00000530990 CDHR5Q9HBB8 845 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 CLIC4Q9Y696 253 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 SLC4A7Q9Y6M7 1214 aa13.27□□□□□ -0.29
LTBP3-219ENST00000530990 GRXCR1A8MXD5 290 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 GPR32O75388 356 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 BMP15O95972 392 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 ZSCAN22P10073 491 aaPredicted RBP13.26□□□□□ -0.29
LTBP3-219ENST00000530990 TMOD1P28289 359 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 CDC25AP30304 524 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 CCT6AP40227 531 aaKnown RBP13.26□□□□□ -0.29
LTBP3-219ENST00000530990 RFC5P40937 340 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 RARRES1P49788 294 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 POLGP54098 1239 aaPredicted RBP13.26□□□□□ -0.29
LTBP3-219ENST00000530990 DEFB103AP81534 67 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 PDIA5Q14554 519 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 PTPAQ15257 358 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 ECM1Q16610 540 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 OTUD6AQ7L8S5 288 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 SLC7A3Q8WY07 619 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 SEPT8Q92599 483 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 ZNF668Q96K58 619 aaPredicted RBP13.26□□□□□ -0.29
LTBP3-219ENST00000530990 CCDC43Q96MW1 224 aaKnown RBP13.26□□□□□ -0.29
LTBP3-219ENST00000530990 MMTAG2Q9BU76 263 aaKnown RBP13.26□□□□□ -0.29
LTBP3-219ENST00000530990 DHX33Q9H6R0 707 aaKnown RBP13.26□□□□□ -0.29
LTBP3-219ENST00000530990 AGO3Q9H9G7 860 aaKnown RBP13.26□□□□□ -0.29
LTBP3-219ENST00000530990 ANKEF1Q9NU02 776 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 PPME1Q9Y570 386 aa13.26□□□□□ -0.29
LTBP3-219ENST00000530990 ABHD14A-ACY1A0A1B0GW23 586 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 F13A1P00488 732 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
LTBP3-219ENST00000530990 CD52P31358 61 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 KCNJ6P48051 423 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 GPC3P51654 580 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 NLRP11P59045 1033 aaKnown RBP13.25□□□□□ -0.29
LTBP3-219ENST00000530990 SMAD3P84022 425 aaKnown RBP13.25□□□□□ -0.29
LTBP3-219ENST00000530990 CEBPZQ03701 1054 aaKnown RBP13.25□□□□□ -0.29
LTBP3-219ENST00000530990 GRIN1Q05586 938 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 IKBKEQ14164 716 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 BECN1Q14457 450 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 APBB2Q92870 758 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 USP28Q96RU2 1077 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 SLC9A7Q96T83 725 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 JPH2Q9BR39 696 aaPredicted RBP13.25□□□□□ -0.29
LTBP3-219ENST00000530990 ADAMTS10Q9H324 1103 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 XPNPEP1Q9NQW7 623 aa13.25□□□□□ -0.29
LTBP3-219ENST00000530990 MYH11P35749 1972 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
LTBP3-219ENST00000530990 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
LTBP3-219ENST00000530990 USO1O60763 962 aaKnown RBP13.24□□□□□ -0.29
LTBP3-219ENST00000530990 MUTP22033 750 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 PBX2P40425 430 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 DNM2P50570 870 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 CRYBB1P53674 252 aaPredicted RBP13.24□□□□□ -0.29
LTBP3-219ENST00000530990 PAK2Q13177 524 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 KRT79Q5XKE5 535 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.24□□□□□ -0.29
LTBP3-219ENST00000530990 TMCO2Q7Z6W1 182 aaPredicted RBP13.24□□□□□ -0.29
LTBP3-219ENST00000530990 USP38Q8NB14 1042 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 NLRP7Q8WX94 980 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 TMEM143Q96AN5 459 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 SCLT1Q96NL6 688 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 NACC1Q96RE7 527 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 MTRQ99707 1265 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 ATP6V0A4Q9HBG4 840 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 DDX19AQ9NUU7 478 aaKnown RBP13.24□□□□□ -0.29
LTBP3-219ENST00000530990 SUCLA2Q9P2R7 463 aaPredicted RBP13.24□□□□□ -0.29
LTBP3-219ENST00000530990 DBR1Q9UK59 544 aaKnown RBP13.24□□□□□ -0.29
LTBP3-219ENST00000530990 PADI3Q9ULW8 664 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 KIAA1024Q9UPX6 916 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 NOC2LQ9Y3T9 749 aaKnown RBP13.24□□□□□ -0.29
LTBP3-219ENST00000530990 SQORQ9Y6N5 450 aa13.24□□□□□ -0.29
LTBP3-219ENST00000530990 TCHHQ07283 1943 aa13.23□□□□□ -0.29
LTBP3-219ENST00000530990 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.23□□□□□ -0.29
LTBP3-219ENST00000530990 GAS2O43903 313 aaKnown RBP13.23□□□□□ -0.29
LTBP3-219ENST00000530990 EFCAB14O75071 495 aa13.23□□□□□ -0.29
LTBP3-219ENST00000530990 DGAT1O75907 488 aa13.23□□□□□ -0.29
LTBP3-219ENST00000530990 XRCC6P12956 609 aaKnown RBP eCLIP13.23□□□□□ -0.29
LTBP3-219ENST00000530990 PDIA4P13667 645 aaKnown RBP13.23□□□□□ -0.29
LTBP3-219ENST00000530990 MARCKSP29966 332 aaPredicted RBP13.23□□□□□ -0.29
LTBP3-219ENST00000530990 RABGGTBP53611 331 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms