RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 RELTQ969Z4 430 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 YTHDC1Q96MU7 727 aaKnown RBP9.95□□□□□ -0.82
CSDE1-213ENST00000530784 MED14O60244 1454 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 DUOX2Q9NRD8 1548 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 VWDEQ8N2E2 1590 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 MROH1Q8NDA8 1641 aa9.95□□□□□ -0.82
CSDE1-213ENST00000530784 PRAMEF25A6NGN4 478 aa9.94□□□□□ -0.82
CSDE1-213ENST00000530784 MROH6A6NGR9 719 aa9.94□□□□□ -0.82
CSDE1-213ENST00000530784 FBXO21O94952 628 aa9.94□□□□□ -0.82
CSDE1-213ENST00000530784 IL18BPO95998 194 aa9.94□□□□□ -0.82
CSDE1-213ENST00000530784 CYP1A1P04798 512 aaPredicted RBP9.94□□□□□ -0.82
CSDE1-213ENST00000530784 IGFALSP35858 605 aa9.94□□□□□ -0.82
CSDE1-213ENST00000530784 PABPC4Q13310 644 aaKnown RBP eCLIP9.94□□□□□ -0.82
CSDE1-213ENST00000530784 ZNF460Q14592 562 aa9.94□□□□□ -0.82
CSDE1-213ENST00000530784 TM4SF20Q53R12 229 aa9.94□□□□□ -0.82
CSDE1-213ENST00000530784 ZCCHC8Q6NZY4 707 aaKnown RBP9.94□□□□□ -0.82
CSDE1-213ENST00000530784 HOMER1Q86YM7 354 aa9.94□□□□□ -0.82
CSDE1-213ENST00000530784 C2orf69Q8N8R5 385 aa9.94□□□□□ -0.82
CSDE1-213ENST00000530784 TMEM168Q9H0V1 697 aa9.94□□□□□ -0.82
CSDE1-213ENST00000530784 FANCLQ9NW38 375 aa9.94□□□□□ -0.82
CSDE1-213ENST00000530784 MRPL42Q9Y6G3 142 aaKnown RBP9.94□□□□□ -0.82
CSDE1-213ENST00000530784 IQGAP1P46940 1657 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 PRDM15P57071 1507 aaPredicted RBP9.93□□□□□ -0.82
CSDE1-213ENST00000530784 OPA1O60313 960 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 TOM1O60784 492 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 RFPL3O75679 317 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 ASLP04424 464 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 KIAA2012Q0VF49 1180 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 SMAD2Q15796 467 aaKnown RBP9.93□□□□□ -0.82
CSDE1-213ENST00000530784 C21orf62-AS1Q17RA5 79 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 DDX53Q86TM3 631 aaKnown RBP9.93□□□□□ -0.82
CSDE1-213ENST00000530784 JAZF1Q86VZ6 243 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 LCORQ96JN0 433 aaPredicted RBP9.93□□□□□ -0.82
CSDE1-213ENST00000530784 TACO1Q9BSH4 297 aaKnown RBP9.93□□□□□ -0.82
CSDE1-213ENST00000530784 KCND1Q9NSA2 647 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 SAMD15Q9P1V8 674 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 ARHGAP28Q9P2N2 729 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 FTSJ1Q9UET6 329 aa9.93□□□□□ -0.82
CSDE1-213ENST00000530784 ERBINQ96RT1 1412 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 KIF15Q9NS87 1388 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 SLC12A8A0AV02 714 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 C9orf118A6NHY6 69 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 B4E1Z4 1266 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 M0R2C6 588 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 KNG1P01042 644 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 CNR2P34972 360 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 TCEA2Q15560 299 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 TKFCQ3LXA3 575 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 ZFYVE27Q5T4F4 411 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 APPBP2Q92624 585 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 CD2APQ9Y5K6 639 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 CROCC2H7BZ55 1655 aa9.92□□□□□ -0.82
CSDE1-213ENST00000530784 CEP152O94986 1710 aa9.91□□□□□ -0.82
CSDE1-213ENST00000530784 FOXD2O60548 495 aaPredicted RBP9.91□□□□□ -0.82
CSDE1-213ENST00000530784 GLRX3O76003 335 aaKnown RBP9.91□□□□□ -0.82
CSDE1-213ENST00000530784 UBXN11Q5T124 520 aa9.91□□□□□ -0.82
CSDE1-213ENST00000530784 FAM124AQ86V42 546 aa9.91□□□□□ -0.82
CSDE1-213ENST00000530784 SYNPOQ8N3V7 929 aa9.91□□□□□ -0.82
CSDE1-213ENST00000530784 NUDT10Q8NFP7 164 aa9.91□□□□□ -0.82
CSDE1-213ENST00000530784 MBD6Q96DN6 1003 aa9.91□□□□□ -0.82
CSDE1-213ENST00000530784 NUDT11Q96G61 164 aa9.91□□□□□ -0.82
CSDE1-213ENST00000530784 KCNH7Q9NS40 1196 aa9.91□□□□□ -0.82
CSDE1-213ENST00000530784 BTBD7Q9P203 1132 aa9.91□□□□□ -0.82
CSDE1-213ENST00000530784 B3GALT1Q9Y5Z6 326 aa9.91□□□□□ -0.82
CSDE1-213ENST00000530784 SYNMO15061 1565 aa9.91□□□□□ -0.82
CSDE1-213ENST00000530784 ABCC5O15440 1437 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 PTPN23Q9H3S7 1636 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 KLHL18O94889 574 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 CHGBP05060 677 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 AOAHP28039 575 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 HSPA1LP34931 641 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 MECP2P51608 486 aaKnown RBP9.9□□□□□ -0.82
CSDE1-213ENST00000530784 HERVK_113P62684 666 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 LCE1DQ5T752 114 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 PKN3Q6P5Z2 889 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 C16orf86Q6ZW13 317 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 CXorf38Q8TB03 319 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 DLG3Q92796 817 aa9.9□□□□□ -0.82
CSDE1-213ENST00000530784 SCAF11Q99590 1463 aaKnown RBP9.9□□□□□ -0.83
CSDE1-213ENST00000530784 DAPK1P53355 1430 aa9.9□□□□□ -0.83
CSDE1-213ENST00000530784 ARHGAP31Q2M1Z3 1444 aa9.9□□□□□ -0.83
CSDE1-213ENST00000530784 MMEP08473 750 aa9.89□□□□□ -0.83
CSDE1-213ENST00000530784 ZBTB48P10074 688 aaPredicted RBP9.89□□□□□ -0.83
CSDE1-213ENST00000530784 PTGS1P23219 599 aa9.89□□□□□ -0.83
CSDE1-213ENST00000530784 MC4RP32245 332 aa9.89□□□□□ -0.83
CSDE1-213ENST00000530784 OTOP1Q7RTM1 612 aa9.89□□□□□ -0.83
CSDE1-213ENST00000530784 RRP7BPQ9NSQ0 103 aa9.89□□□□□ -0.83
CSDE1-213ENST00000530784 UBR1Q8IWV7 1749 aa9.89□□□□□ -0.83
CSDE1-213ENST00000530784 FGD6Q6ZV73 1430 aa9.89□□□□□ -0.83
CSDE1-213ENST00000530784 MED1Q15648 1581 aaPredicted RBP9.88□□□□□ -0.83
CSDE1-213ENST00000530784 SLIT1O75093 1534 aa9.88□□□□□ -0.83
CSDE1-213ENST00000530784 LRRC7Q96NW7 1537 aa9.88□□□□□ -0.83
CSDE1-213ENST00000530784 IRF9Q00978 393 aa9.88□□□□□ -0.83
CSDE1-213ENST00000530784 PIK3R6Q5UE93 754 aa9.88□□□□□ -0.83
CSDE1-213ENST00000530784 BORAQ6PGQ7 559 aa9.88□□□□□ -0.83
CSDE1-213ENST00000530784 LGI4Q8N135 537 aa9.88□□□□□ -0.83
CSDE1-213ENST00000530784 BOCQ9BWV1 1114 aa9.88□□□□□ -0.83
CSDE1-213ENST00000530784 INVSQ9Y283 1065 aa9.88□□□□□ -0.83
CSDE1-213ENST00000530784 KANK1Q14678 1352 aa9.88□□□□□ -0.83
CSDE1-213ENST00000530784 ARHGAP23Q9P227 1491 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms