RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 ADAMTS3O15072 1205 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 VHLP40337 213 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 SNRNP27Q8WVK2 155 aaKnown RBP15.28■□□□□ 0.04
PCF11-204ENST00000530660 RAPGEF4Q8WZA2 1011 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 LZTS2Q9BRK4 669 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 EPB41L4AQ9HCS5 686 aaPredicted RBP15.28■□□□□ 0.04
PCF11-204ENST00000530660 FAM114A2Q9NRY5 505 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 SPATA31A3Q5VYP0 1347 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 MAGEA13PA6NCF6 341 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 RHOBTB3O94955 611 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 FGFR4P22455 802 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 USP11P51784 963 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 OLFML2BQ68BL8 750 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 RFWD3Q6PCD5 774 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 PIK3AP1Q6ZUJ8 805 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 GLG1Q92896 1179 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 DHTKD1Q96HY7 919 aaPredicted RBP15.27■□□□□ 0.04
PCF11-204ENST00000530660 PHF20Q9BVI0 1012 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 FAM192AQ9GZU8 254 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 TXLNGQ9NUQ3 528 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 HSFX1Q9UBD0 423 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 SLIT3O75094 1523 aa15.27■□□□□ 0.04
PCF11-204ENST00000530660 SSU72P8A0A1W2PR75 194 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 RBAK-RBAKDNI3L0D1 243 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 SKIV2L2P42285 1042 aaKnown RBP15.27■□□□□ 0.03
PCF11-204ENST00000530660 ADCY1Q08828 1119 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 LSAMPQ13449 338 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 PKN1Q16512 942 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 SLC9C1Q4G0N8 1177 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 FBXO25Q8TCJ0 367 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 LRRC15Q8TF66 581 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 ABTB1Q969K4 478 aaPredicted RBP15.27■□□□□ 0.03
PCF11-204ENST00000530660 IQCDQ96DY2 449 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 DDX27Q96GQ7 796 aaKnown RBP15.27■□□□□ 0.03
PCF11-204ENST00000530660 IWS1Q96ST2 819 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 KCNK9Q9NPC2 374 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 RTCBQ9Y3I0 505 aaKnown RBP15.27■□□□□ 0.03
PCF11-204ENST00000530660 CBX6O95503 412 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 BMP15O95972 392 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 PDE4DQ08499 809 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 AUHQ13825 339 aaKnown RBP15.27■□□□□ 0.03
PCF11-204ENST00000530660 WTAPQ15007 396 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 C6orf118Q5T5N4 469 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 DTX3LQ8TDB6 740 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 SEC14L1Q92503 715 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 DISC1Q9NRI5 854 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 SNX24Q9Y343 169 aa15.27■□□□□ 0.03
PCF11-204ENST00000530660 V9GY48 417 aaPredicted RBP15.27■□□□□ 0.03
PCF11-204ENST00000530660 ZNF24P17028 368 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 RTP1P59025 263 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 CBX3Q13185 183 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 RASA3Q14644 834 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 RCN1Q15293 331 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 INTS8Q75QN2 995 aaKnown RBP15.26■□□□□ 0.03
PCF11-204ENST00000530660 COL23A1Q86Y22 540 aaPredicted RBP15.26■□□□□ 0.03
PCF11-204ENST00000530660 KSR1Q8IVT5 923 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 AGGF1Q8N302 714 aaeCLIP15.26■□□□□ 0.03
PCF11-204ENST00000530660 AGBL1Q96MI9 1066 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 STRBPQ96SI9 672 aaKnown RBP15.26■□□□□ 0.03
PCF11-204ENST00000530660 NAPBQ9H115 298 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 DCLRE1BQ9H816 532 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 ZDHHC18Q9NUE0 388 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 STOML1Q9UBI4 398 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 CTNNAL1Q9UBT7 734 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 A6NJR5 290 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 SUPT3HO75486 399 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 TMCC1O94876 653 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 PDE6AP16499 860 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 PLOD1Q02809 727 aaPredicted RBP15.26■□□□□ 0.03
PCF11-204ENST00000530660 NCSTNQ92542 709 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 SLC7A6OSQ96CW6 309 aaPredicted RBP15.26■□□□□ 0.03
PCF11-204ENST00000530660 DYDC2Q96IM9 177 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 TGS1Q96RS0 853 aaKnown RBP15.26■□□□□ 0.03
PCF11-204ENST00000530660 NLRP2Q9NX02 1062 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 DISP2A7MBM2 1401 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 LAMB4A4D0S4 1761 aa15.26■□□□□ 0.03
PCF11-204ENST00000530660 PABPC4Q13310 644 aaKnown RBP eCLIP15.25■□□□□ 0.03
PCF11-204ENST00000530660 IFNL3Q8IZI9 196 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 TANGO6Q9C0B7 1094 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 PDP2Q9P2J9 529 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 USP20Q9Y2K6 914 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 ARHGAP23Q9P227 1491 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 RPTORQ8N122 1335 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 RASGRF2O14827 1237 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 HNRNPCP07910 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
PCF11-204ENST00000530660 MPP2Q14168 576 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 DUS1LQ6P1R4 473 aaKnown RBP15.25■□□□□ 0.03
PCF11-204ENST00000530660 DNAJC1Q96KC8 554 aaKnown RBP15.25■□□□□ 0.03
PCF11-204ENST00000530660 SEMA6BQ9H3T3 888 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 FAM170AA1A519 330 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 BICDL2A1A5D9 508 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 CCDC188H7C350 402 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 KRT36O76013 467 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 NEK3P51956 506 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 KLRC3Q07444 240 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 MFSD6Q6ZSS7 791 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 BARGINQ6ZT62 677 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 KBTBD2Q8IY47 623 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 ZNF654Q8IZM8 581 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 SLC35B4Q969S0 331 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms