RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 AKT3Q9Y243 479 aa23.6■■□□□ 1.37
SMPD1-204ENST00000530395 GRXCR2A6NFK2 248 aa23.59■■□□□ 1.37
SMPD1-204ENST00000530395 IL9P15248 144 aa23.59■■□□□ 1.37
SMPD1-204ENST00000530395 PRKCEQ02156 737 aa23.59■■□□□ 1.37
SMPD1-204ENST00000530395 STK3Q13188 491 aa23.59■■□□□ 1.37
SMPD1-204ENST00000530395 GALNT17Q6IS24 598 aa23.59■■□□□ 1.37
SMPD1-204ENST00000530395 SLC24A5Q71RS6 500 aa23.59■■□□□ 1.37
SMPD1-204ENST00000530395 BLIDQ8IZY5 108 aa23.59■■□□□ 1.37
SMPD1-204ENST00000530395 PPP2R3CQ969Q6 453 aa23.59■■□□□ 1.37
SMPD1-204ENST00000530395 PDRG1Q9NUG6 133 aa23.59■■□□□ 1.37
SMPD1-204ENST00000530395 PLAGL2Q9UPG8 496 aa23.59■■□□□ 1.37
SMPD1-204ENST00000530395 MGEA5O60502 916 aa23.58■■□□□ 1.37
SMPD1-204ENST00000530395 CSPG5O95196 566 aa23.58■■□□□ 1.37
SMPD1-204ENST00000530395 CLCN3P51790 818 aa23.58■■□□□ 1.37
SMPD1-204ENST00000530395 Q4G0T1 1027 aa23.58■■□□□ 1.37
SMPD1-204ENST00000530395 EFCAB12Q6NXP0 572 aa23.58■■□□□ 1.37
SMPD1-204ENST00000530395 FAM228AQ86W67 206 aa23.58■■□□□ 1.37
SMPD1-204ENST00000530395 FAM178BQ8IXR5 827 aa23.58■■□□□ 1.37
SMPD1-204ENST00000530395 DAGLBQ8NCG7 672 aa23.58■■□□□ 1.37
SMPD1-204ENST00000530395 RDM1Q8NG50 284 aa23.58■■□□□ 1.37
SMPD1-204ENST00000530395 EDIL3O43854 480 aa23.57■■□□□ 1.36
SMPD1-204ENST00000530395 GPR32O75388 356 aa23.57■■□□□ 1.36
SMPD1-204ENST00000530395 CDKL5O76039 1030 aa23.57■■□□□ 1.36
SMPD1-204ENST00000530395 GATMP50440 423 aa23.57■■□□□ 1.36
SMPD1-204ENST00000530395 SPOUT1Q5T280 376 aaKnown RBP23.57■■□□□ 1.36
SMPD1-204ENST00000530395 LARP6Q9BRS8 491 aaKnown RBP23.57■■□□□ 1.36
SMPD1-204ENST00000530395 UNC45AQ9H3U1 944 aa23.57■■□□□ 1.36
SMPD1-204ENST00000530395 AAASQ9NRG9 546 aa23.57■■□□□ 1.36
SMPD1-204ENST00000530395 PLXNA4Q9HCM2 1894 aa23.57■■□□□ 1.36
SMPD1-204ENST00000530395 CYP3A7-CYP3A51PA0A087WV96 503 aa23.56■■□□□ 1.36
SMPD1-204ENST00000530395 ZNF862O60290 1169 aa23.56■■□□□ 1.36
SMPD1-204ENST00000530395 ITGB1P05556 798 aa23.56■■□□□ 1.36
SMPD1-204ENST00000530395 CYP3A7P24462 503 aa23.56■■□□□ 1.36
SMPD1-204ENST00000530395 SSTR3P32745 418 aaPredicted RBP23.56■■□□□ 1.36
SMPD1-204ENST00000530395 NLRP11P59045 1033 aaKnown RBP23.56■■□□□ 1.36
SMPD1-204ENST00000530395 HYAL1Q12794 435 aa23.56■■□□□ 1.36
SMPD1-204ENST00000530395 MIER3Q7Z3K6 550 aa23.56■■□□□ 1.36
SMPD1-204ENST00000530395 GJD3Q8N144 294 aa23.56■■□□□ 1.36
SMPD1-204ENST00000530395 LRRC71Q8N4P6 559 aa23.56■■□□□ 1.36
SMPD1-204ENST00000530395 KLHL23Q8NBE8 558 aa23.56■■□□□ 1.36
SMPD1-204ENST00000530395 EPHX3Q9H6B9 360 aa23.56■■□□□ 1.36
SMPD1-204ENST00000530395 TBKBP1A7MCY6 615 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 C9IYK1 514 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 PSMD10O75832 226 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 TDP2O95551 362 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 TBC1D8BQ0IIM8 1120 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 NONOQ15233 471 aaKnown RBP eCLIP23.55■■□□□ 1.36
SMPD1-204ENST00000530395 UGCGQ16739 394 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 CTC1Q2NKJ3 1217 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 MOXD1Q6UVY6 613 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 KRT25Q7Z3Z0 450 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 LINC01465Q8N7H1 131 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 SPPL3Q8TCT6 385 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 SCLT1Q96NL6 688 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 ATP6V0A4Q9HBG4 840 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 TMEM161AQ9NX61 479 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 PCDHB12Q9Y5F1 795 aa23.55■■□□□ 1.36
SMPD1-204ENST00000530395 M0R2N6 131 aa23.54■■□□□ 1.36
SMPD1-204ENST00000530395 XBP1P17861 261 aa23.54■■□□□ 1.36
SMPD1-204ENST00000530395 GJA10Q969M2 543 aa23.54■■□□□ 1.36
SMPD1-204ENST00000530395 AIFM3Q96NN9 605 aa23.54■■□□□ 1.36
SMPD1-204ENST00000530395 IGFLR1Q9H665 355 aa23.54■■□□□ 1.36
SMPD1-204ENST00000530395 ELAC1Q9H777 363 aaKnown RBP23.54■■□□□ 1.36
SMPD1-204ENST00000530395 CD320Q9NPF0 282 aa23.54■■□□□ 1.36
SMPD1-204ENST00000530395 SEPT9Q9UHD8 586 aaPredicted RBP23.54■■□□□ 1.36
SMPD1-204ENST00000530395 C5orf42Q9H799 3197 aa23.54■■□□□ 1.36
SMPD1-204ENST00000530395 HOXA2O43364 376 aa23.53■■□□□ 1.36
SMPD1-204ENST00000530395 ZSCAN20P17040 1043 aaPredicted RBP23.53■■□□□ 1.36
SMPD1-204ENST00000530395 EIF4BP23588 611 aaKnown RBP23.53■■□□□ 1.36
SMPD1-204ENST00000530395 LTBRP36941 435 aa23.53■■□□□ 1.36
SMPD1-204ENST00000530395 CAMK1Q14012 370 aa23.53■■□□□ 1.36
SMPD1-204ENST00000530395 CSPP1Q1MSJ5 1256 aa23.53■■□□□ 1.36
SMPD1-204ENST00000530395 POF1BQ8WVV4 589 aa23.53■■□□□ 1.36
SMPD1-204ENST00000530395 MBOAT7Q96N66 472 aa23.53■■□□□ 1.36
SMPD1-204ENST00000530395 SLKQ9H2G2 1235 aaPredicted RBP23.53■■□□□ 1.36
SMPD1-204ENST00000530395 ADAMTS10Q9H324 1103 aa23.53■■□□□ 1.36
SMPD1-204ENST00000530395 PRKAG3Q9UGI9 489 aa23.53■■□□□ 1.36
SMPD1-204ENST00000530395 DDX25Q9UHL0 483 aaKnown RBP23.53■■□□□ 1.36
SMPD1-204ENST00000530395 STK36Q9NRP7 1315 aa23.53■■□□□ 1.36
SMPD1-204ENST00000530395 DNAJB1P25685 340 aa23.52■■□□□ 1.36
SMPD1-204ENST00000530395 FAM189BP81408 668 aa23.52■■□□□ 1.36
SMPD1-204ENST00000530395 UBE3AQ05086 875 aa23.52■■□□□ 1.36
SMPD1-204ENST00000530395 SCRN1Q12765 414 aa23.52■■□□□ 1.36
SMPD1-204ENST00000530395 DSC3Q14574 896 aa23.52■■□□□ 1.36
SMPD1-204ENST00000530395 NPY5RQ15761 445 aa23.52■■□□□ 1.36
SMPD1-204ENST00000530395 XKR3Q5GH77 459 aa23.52■■□□□ 1.36
SMPD1-204ENST00000530395 TMEM31Q5JXX7 168 aa23.52■■□□□ 1.36
SMPD1-204ENST00000530395 FAM102BQ5T8I3 360 aa23.52■■□□□ 1.36
SMPD1-204ENST00000530395 ETNPPLQ8TBG4 499 aa23.52■■□□□ 1.36
SMPD1-204ENST00000530395 CCDC194A0A1B0GVG4 234 aa23.51■■□□□ 1.35
SMPD1-204ENST00000530395 GPC3P51654 580 aa23.51■■□□□ 1.35
SMPD1-204ENST00000530395 CDC42EP1Q00587 391 aa23.51■■□□□ 1.35
SMPD1-204ENST00000530395 INF2Q27J81 1249 aa23.51■■□□□ 1.35
SMPD1-204ENST00000530395 MTERF2Q49AM1 385 aa23.51■■□□□ 1.35
SMPD1-204ENST00000530395 NLRP7Q8WX94 980 aa23.51■■□□□ 1.35
SMPD1-204ENST00000530395 KHSRPQ92945 711 aaKnown RBP eCLIP23.51■■□□□ 1.35
SMPD1-204ENST00000530395 KCNJ14Q9UNX9 436 aa23.51■■□□□ 1.35
SMPD1-204ENST00000530395 PI4K2BG5E9Z4 385 aa23.5■■□□□ 1.35
SMPD1-204ENST00000530395 FGFR1P11362 822 aa23.5■■□□□ 1.35
SMPD1-204ENST00000530395 NDUFV1P49821 464 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms