RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 DCHS1Q96JQ0 3298 aa12.91□□□□□ -0.34
SF3B2-208ENST00000529994 GPR182O15218 404 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 PRC1O43663 620 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 CDC45O75419 566 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 DDAH1O94760 285 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 HOXB8P17481 243 aaPredicted RBP12.9□□□□□ -0.34
SF3B2-208ENST00000529994 NBL1P41271 181 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 PLCB3Q01970 1234 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 CREB3L3Q68CJ9 461 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 CES5AQ6NT32 575 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 KANK3Q6NY19 840 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 KCNT2Q6UVM3 1135 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 TRMT1LQ7Z2T5 733 aaKnown RBP12.9□□□□□ -0.34
SF3B2-208ENST00000529994 HEATR3Q7Z4Q2 680 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 FAM228AQ86W67 206 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 UBALD2Q8IYN6 164 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 RASGRP4Q8TDF6 673 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 CASD1Q96PB1 797 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 MAP3K14Q99558 947 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 LZTS2Q9BRK4 669 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 LRRC2Q9BYS8 371 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 NGRNQ9NPE2 291 aaKnown RBP12.9□□□□□ -0.34
SF3B2-208ENST00000529994 TMEM161AQ9NX61 479 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 LZTS1Q9Y250 596 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 HCFC2Q9Y5Z7 792 aa12.9□□□□□ -0.34
SF3B2-208ENST00000529994 MYH9P35579 1960 aaKnown RBP12.9□□□□□ -0.34
SF3B2-208ENST00000529994 NFASCO94856 1347 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 GVINP1Q7Z2Y8 2422 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 HBP1O60381 514 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 VTNP04004 478 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 SMARCA1P28370 1054 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 NUBP1P53384 320 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 KRT17Q04695 432 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 COL9A3Q14050 684 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-208ENST00000529994 TPRNQ4KMQ1 711 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 ASTLQ6HA08 431 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-208ENST00000529994 C12orf76Q8N812 135 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-208ENST00000529994 RNF169Q8NCN4 708 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 CASP10Q92851 521 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 ZNF558Q96NG5 402 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 TMEM117Q9H0C3 514 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 ADAM7Q9H2U9 754 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 MFSD1Q9H3U5 465 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 AGO4Q9HCK5 861 aaKnown RBP12.89□□□□□ -0.35
SF3B2-208ENST00000529994 RNF19AQ9NV58 838 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-208ENST00000529994 LIMD1Q9UGP4 676 aa12.89□□□□□ -0.35
SF3B2-208ENST00000529994 CCDC69A6NI79 296 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 ZBTB42B2RXF5 422 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 ATG7O95352 703 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 CCNE2O96020 404 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 GNAQP50148 359 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 FAM189BP81408 668 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 DSC3Q14574 896 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 ODR4Q5SWX8 454 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 RARS2Q5T160 578 aaKnown RBP12.88□□□□□ -0.35
SF3B2-208ENST00000529994 CCDC60Q8IWA6 550 aaPredicted RBP12.88□□□□□ -0.35
SF3B2-208ENST00000529994 ADSSL1Q8N142 457 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 METTL13Q8N6R0 699 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 FLCNQ8NFG4 579 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 NKD2Q969F2 451 aaPredicted RBP12.88□□□□□ -0.35
SF3B2-208ENST00000529994 ZNF668Q96K58 619 aaPredicted RBP12.88□□□□□ -0.35
SF3B2-208ENST00000529994 SPG21Q9NZD8 308 aa12.88□□□□□ -0.35
SF3B2-208ENST00000529994 IGKV6D-21A0A0A0MT36 114 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 C2orf71A6NGG8 1288 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 NT5C1B-RDH14C9J2C7 533 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 SH2B2O14492 632 aaPredicted RBP12.87□□□□□ -0.35
SF3B2-208ENST00000529994 CLASP2O75122 1294 aaKnown RBP12.87□□□□□ -0.35
SF3B2-208ENST00000529994 ATP4AP20648 1035 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 MCM5P33992 734 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 PPM1AP35813 382 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 SLC26A2P50443 739 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 CRYBB1P53674 252 aaPredicted RBP12.87□□□□□ -0.35
SF3B2-208ENST00000529994 ITIH3Q06033 890 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
SF3B2-208ENST00000529994 CEP55Q53EZ4 464 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 FAM160B1Q5W0V3 765 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 SWSAP1Q6NVH7 229 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 PDXDC2PQ6P474 469 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 ABHD15Q6UXT9 468 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 CKAP2LQ8IYA6 745 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 ABI1Q8IZP0 508 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 LRRC43Q8N309 656 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 MRPL43Q8N983 215 aaKnown RBP12.87□□□□□ -0.35
SF3B2-208ENST00000529994 TDRD5Q8NAT2 981 aaKnown RBP12.87□□□□□ -0.35
SF3B2-208ENST00000529994 FEZF2Q8TBJ5 459 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 NECTIN4Q96NY8 510 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 ELAC1Q9H777 363 aaKnown RBP12.87□□□□□ -0.35
SF3B2-208ENST00000529994 ZNF302Q9NR11 478 aa12.87□□□□□ -0.35
SF3B2-208ENST00000529994 DBR1Q9UK59 544 aaKnown RBP12.87□□□□□ -0.35
SF3B2-208ENST00000529994 COL1A2P08123 1366 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 EP300Q09472 2414 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-208ENST00000529994 GPR32O75388 356 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 C22orf31O95567 290 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 ZNF76P36508 570 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 MTHFRP42898 656 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 ID4P47928 161 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 METAP2P50579 478 aaKnown RBP eCLIP12.86□□□□□ -0.35
SF3B2-208ENST00000529994 CLCN3P51790 818 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 NAPAP54920 295 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms