RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 PRCPP42785 496 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 NEK2P51955 445 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 MRPS15P82914 257 aaKnown RBP8.17□□□□□ -1.1
CTNND1-223ENST00000529986 YWHAHQ04917 246 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-223ENST00000529986 NBPF20Q3BBV1 942 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 TRAPPC3LQ5T215 181 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 SCARA5Q6ZMJ2 495 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 SPICE1Q8N0Z3 855 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 OR2W6PQ8NHA6 318 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 USP6NLQ92738 828 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 IPO11Q9UI26 975 aaKnown RBP8.17□□□□□ -1.1
CTNND1-223ENST00000529986 ABCA6Q8N139 1617 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 ANO9A1A5B4 782 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 STXBP3O00186 592 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 EIF3HO15372 352 aaKnown RBP eCLIP8.17□□□□□ -1.12e-7■■□□□ 12
CTNND1-223ENST00000529986 KCNA3P22001 575 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 SEC24CP53992 1094 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 CCDC85BQ15834 202 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-223ENST00000529986 UBE2SQ16763 222 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 BRDTQ58F21 947 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-223ENST00000529986 RABGAP1LQ5R372 815 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 CATSPER3Q86XQ3 398 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 ARHGAP18Q8N392 663 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 RNF217Q8TC41 542 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 PAGR1Q9BTK6 254 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 SLC13A1Q9BZW2 595 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 GREM2Q9H772 168 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 MRPL47Q9HD33 250 aaKnown RBP8.17□□□□□ -1.1
CTNND1-223ENST00000529986 BTG4Q9NY30 223 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 PLA2G4BP0C869 781 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 UBTFL6P0CB48 400 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-223ENST00000529986 KDSRQ06136 332 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 FLOT2Q14254 428 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 ZBTB10Q96DT7 871 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 VPS11Q9H270 941 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 SMARCAL1Q9NZC9 954 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 EHD2Q9NZN4 543 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 AMACRQ9UHK6 382 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 SNX5Q9Y5X3 404 aa8.17□□□□□ -1.1
CTNND1-223ENST00000529986 TTI1O43156 1089 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 KRT37O76014 449 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 ZBED1O96006 694 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 CCDC159P0C7I6 412 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 HSPA8P11142 646 aaKnown RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 MXI1P50539 228 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 BTKQ06187 659 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 CUL3Q13618 768 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 UBE3CQ15386 1083 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 OR6B2Q6IFH4 312 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 KRT26Q7Z3Y9 468 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 C7orf31Q8N865 590 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 SPATA4Q8NEY3 305 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 ASCC2Q9H1I8 757 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 SLC38A10Q9HBR0 1119 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 SUCLA2Q9P2R7 463 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 STX18Q9P2W9 335 aaKnown RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 SEPT9Q9UHD8 586 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 ANAPC7Q9UJX3 599 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 CEP152O94986 1710 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 IGSF1Q8N6C5 1336 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 PGM1P36871 562 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 BTDP43251 543 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 OSTNP61366 133 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 CCZ1BP86790 482 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 CCZ1P86791 482 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 TMC4Q7Z404 712 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 PPP1R36Q96LQ0 422 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 GTSE1Q9NYZ3 720 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 TSC22D4Q9Y3Q8 395 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 POLR1AO95602 1720 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 PLEKHA8P1O95397 391 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 CHN1P15882 459 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 GCFC2P16383 781 aaKnown RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 IFNAR1P17181 557 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 ARHGDIAP52565 204 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 SLFN13Q68D06 897 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 ANGPTL8Q6UXH0 198 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 SPATA21Q7Z572 469 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 PPM1NQ8N819 430 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 CYFIP2Q96F07 1278 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 ACCSQ96QU6 501 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 DNAJC12Q9UKB3 198 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 PAIP2BQ9ULR5 123 aaKnown RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 GOLGA8RI6L899 631 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 IPO5O00410 1097 aaKnown RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 ARHGEF9O43307 516 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 ENO1P06733 434 aaKnown RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 ATXN3P54252 364 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 TFAMQ00059 246 aaKnown RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 KLC1Q07866 573 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 NCAPHQ15003 741 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 NOP9Q86U38 636 aaKnown RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 PASD1Q8IV76 773 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 LCORLQ8N3X6 602 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 CHURC1Q8WUH1 139 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 RNF25Q96BH1 459 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 THAP11Q96EK4 314 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 TRIM10Q9UDY6 481 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 NOC2LQ9Y3T9 749 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms