RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 KIZQ2M2Z5 673 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 MIS18BP1Q6P0N0 1132 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 PDXDC2PQ6P474 469 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 SYCE2Q6PIF2 218 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 SYNE3Q6ZMZ3 975 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 NIPA1Q7RTP0 329 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 SGMS1Q86VZ5 419 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 FAM228AQ86W67 206 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 CCDC60Q8IWA6 550 aaPredicted RBP18.28■□□□□ 0.52
COL16A1-216ENST00000529928 ATOH1Q92858 354 aaPredicted RBP18.28■□□□□ 0.52
COL16A1-216ENST00000529928 OSMRQ99650 979 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 TMEM117Q9H0C3 514 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 FAM86C1Q9NVL1 165 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 NR2E1Q9Y466 385 aa18.28■□□□□ 0.52
COL16A1-216ENST00000529928 CNTNAP5Q8WYK1 1306 aa18.27■□□□□ 0.52
COL16A1-216ENST00000529928 ZBTB42B2RXF5 422 aa18.27■□□□□ 0.52
COL16A1-216ENST00000529928 hCG_1984214I3L0E3 225 aa18.27■□□□□ 0.52
COL16A1-216ENST00000529928 PPM1AP35813 382 aa18.27■□□□□ 0.52
COL16A1-216ENST00000529928 KRT17Q04695 432 aa18.27■□□□□ 0.52
COL16A1-216ENST00000529928 AP3B2Q13367 1082 aa18.27■□□□□ 0.52
COL16A1-216ENST00000529928 TYW1BQ6NUM6 668 aa18.27■□□□□ 0.52
COL16A1-216ENST00000529928 LLGL2Q6P1M3 1020 aa18.27■□□□□ 0.52
COL16A1-216ENST00000529928 ZNF713Q8N859 430 aaPredicted RBP18.27■□□□□ 0.52
COL16A1-216ENST00000529928 RIPOR3Q96MK2 946 aa18.27■□□□□ 0.52
COL16A1-216ENST00000529928 ZNF558Q96NG5 402 aa18.27■□□□□ 0.52
COL16A1-216ENST00000529928 GLT8D2Q9H1C3 349 aa18.27■□□□□ 0.52
COL16A1-216ENST00000529928 RBM28Q9NW13 759 aaKnown RBP18.27■□□□□ 0.52
COL16A1-216ENST00000529928 HIDE1A8MVS5 230 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 SLC27A2O14975 620 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 C22orf31O95567 290 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 COL9A3Q14050 684 aaPredicted RBP18.26■□□□□ 0.51
COL16A1-216ENST00000529928 DSC3Q14574 896 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 TPRNQ4KMQ1 711 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 SWSAP1Q6NVH7 229 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 KCNT2Q6UVM3 1135 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 CKAP2LQ8IYA6 745 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 ABI1Q8IZP0 508 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 LRRC43Q8N309 656 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 METTL13Q8N6R0 699 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 BBXQ8WY36 941 aaPredicted RBP18.26■□□□□ 0.51
COL16A1-216ENST00000529928 CASP10Q92851 521 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 PPP1R16BQ96T49 567 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 APOL5Q9BWW9 433 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 LRRC2Q9BYS8 371 aa18.26■□□□□ 0.51
COL16A1-216ENST00000529928 USP34Q70CQ2 3546 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 SMCO2A6NFE2 343 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 IPO5O00410 1097 aaKnown RBP18.25■□□□□ 0.51
COL16A1-216ENST00000529928 GPR32O75388 356 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 VTNP04004 478 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 SP100P23497 879 aaPredicted RBP18.25■□□□□ 0.51
COL16A1-216ENST00000529928 APOA5Q6Q788 366 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 TMC7Q7Z402 723 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 PLA2G4DQ86XP0 818 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 UBALD2Q8IYN6 164 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 KREMEN2Q8NCW0 462 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 CASD1Q96PB1 797 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 LSG1Q9H089 658 aaKnown RBP18.25■□□□□ 0.51
COL16A1-216ENST00000529928 CEP131Q9UPN4 1083 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 SORCS3Q9UPU3 1222 aa18.25■□□□□ 0.51
COL16A1-216ENST00000529928 FAM86B1E9PN63 330 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 DHX15O43143 795 aaKnown RBP18.24■□□□□ 0.51
COL16A1-216ENST00000529928 FAM86B2P0C5J1 330 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 ZSCAN20P17040 1043 aaPredicted RBP18.24■□□□□ 0.51
COL16A1-216ENST00000529928 ATP4AP20648 1035 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 CLK2P49760 499 aaKnown RBP18.24■□□□□ 0.51
COL16A1-216ENST00000529928 ITIH3Q06033 890 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 MTMR3Q13615 1198 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 CES5AQ6NT32 575 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 LRRC55Q6ZSA7 311 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 ZNF710Q8N1W2 664 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 NECTIN4Q96NY8 510 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 TSHZ2Q9NRE2 1034 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 TBC1D22BQ9NU19 505 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 BARHL2Q9NY43 387 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 SPG21Q9NZD8 308 aa18.24■□□□□ 0.51
COL16A1-216ENST00000529928 MAFBQ9Y5Q3 323 aaPredicted RBP18.24■□□□□ 0.51
COL16A1-216ENST00000529928 EVPLQ92817 2033 aa18.23■□□□□ 0.51
COL16A1-216ENST00000529928 IGLV3-22A0A075B6J6 115 aa18.23■□□□□ 0.51
COL16A1-216ENST00000529928 H0Y858 1186 aa18.23■□□□□ 0.51
COL16A1-216ENST00000529928 PDGFBP01127 241 aaPredicted RBP18.23■□□□□ 0.51
COL16A1-216ENST00000529928 SMC1AQ14683 1233 aaKnown RBP18.23■□□□□ 0.51
COL16A1-216ENST00000529928 NECTIN1Q15223 517 aa18.23■□□□□ 0.51
COL16A1-216ENST00000529928 CREB3L3Q68CJ9 461 aa18.23■□□□□ 0.51
COL16A1-216ENST00000529928 ZNF746Q6NUN9 644 aaPredicted RBP18.23■□□□□ 0.51
COL16A1-216ENST00000529928 SMAP1Q8IYB5 467 aaPredicted RBP18.23■□□□□ 0.51
COL16A1-216ENST00000529928 MAP7D2Q96T17 732 aa18.23■□□□□ 0.51
COL16A1-216ENST00000529928 ADAM7Q9H2U9 754 aa18.23■□□□□ 0.51
COL16A1-216ENST00000529928 RNF19AQ9NV58 838 aa18.23■□□□□ 0.51
COL16A1-216ENST00000529928 TCEAL9Q9UHQ7 104 aa18.23■□□□□ 0.51
COL16A1-216ENST00000529928 V9GY48 417 aaPredicted RBP18.23■□□□□ 0.51
COL16A1-216ENST00000529928 PROB1E7EW31 1015 aa18.22■□□□□ 0.51
COL16A1-216ENST00000529928 MAGEB2O15479 319 aa18.22■□□□□ 0.51
COL16A1-216ENST00000529928 GALR2O43603 387 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-216ENST00000529928 PBX3P40426 434 aa18.22■□□□□ 0.51
COL16A1-216ENST00000529928 NLRP11P59045 1033 aaKnown RBP18.22■□□□□ 0.51
COL16A1-216ENST00000529928 SETQ01105 290 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-216ENST00000529928 FUT2Q10981 343 aa18.22■□□□□ 0.51
COL16A1-216ENST00000529928 RTN1Q16799 776 aa18.22■□□□□ 0.51
COL16A1-216ENST00000529928 ECHDC2Q86YB7 292 aa18.22■□□□□ 0.51
COL16A1-216ENST00000529928 MRPL43Q8N983 215 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms