RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 VAV3Q9UKW4 847 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 COG5Q9UP83 839 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 LIMCH1Q9UPQ0 1083 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 ADGRA3Q8IWK6 1321 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 GPR182O15218 404 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 RPS6KA5O75582 802 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 UPP2O95045 317 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 MMP1P03956 469 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 STAG3L1P0CL83 205 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 MRPS5P82675 430 aaKnown RBP13.57□□□□□ -0.24
COPB1-206ENST00000529210 CDC42EP1Q00587 391 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 CCDC85BQ15834 202 aaPredicted RBP13.57□□□□□ -0.24
COPB1-206ENST00000529210 EARS2Q5JPH6 523 aaKnown RBP13.57□□□□□ -0.24
COPB1-206ENST00000529210 EFCAB12Q6NXP0 572 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 PIK3AP1Q6ZUJ8 805 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 TMEM192Q8IY95 271 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 FIBCD1Q8N539 461 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 HAS1Q92839 578 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 GJA10Q969M2 543 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 ASB2Q96Q27 587 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 KIF2CQ99661 725 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 LLPHQ9BRT6 129 aaKnown RBP13.57□□□□□ -0.24
COPB1-206ENST00000529210 ADAMTS10Q9H324 1103 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 CDHR5Q9HBB8 845 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 C1orf112Q9NSG2 853 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 NOC2LQ9Y3T9 749 aaKnown RBP13.57□□□□□ -0.24
COPB1-206ENST00000529210 PPME1Q9Y570 386 aa13.57□□□□□ -0.24
COPB1-206ENST00000529210 CHMP2AO43633 222 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 CCNT1O60563 726 aaKnown RBP13.56□□□□□ -0.24
COPB1-206ENST00000529210 DKC1O60832 514 aaKnown RBP eCLIP13.56□□□□□ -0.24
COPB1-206ENST00000529210 SARSP49591 514 aaKnown RBP13.56□□□□□ -0.24
COPB1-206ENST00000529210 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
COPB1-206ENST00000529210 CLCN3P51790 818 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 PSMC5P62195 406 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 SPIRE1Q08AE8 756 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 NR5A1Q13285 461 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 DSC3Q14574 896 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 KIZQ2M2Z5 673 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 KRT40Q6A162 431 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 FAM228AQ86W67 206 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 SLFN12Q8IYM2 578 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 CMTR2Q8IYT2 770 aaKnown RBP13.56□□□□□ -0.24
COPB1-206ENST00000529210 MRPL38Q96DV4 380 aaKnown RBP13.56□□□□□ -0.24
COPB1-206ENST00000529210 MAP7D2Q96T17 732 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 RGS18Q9NS28 235 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 ST3GAL5Q9UNP4 418 aa13.56□□□□□ -0.24
COPB1-206ENST00000529210 C9IYK1 514 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 EML1O00423 815 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 MGEA5O60502 916 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 JAK2O60674 1132 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 VTNP04004 478 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 P4HBP07237 508 aaKnown RBP13.55□□□□□ -0.24
COPB1-206ENST00000529210 EIF4BP23588 611 aaKnown RBP13.55□□□□□ -0.24
COPB1-206ENST00000529210 BMPR1AP36894 532 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 QARSP47897 775 aaKnown RBP13.55□□□□□ -0.24
COPB1-206ENST00000529210 GPC3P51654 580 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 FAM189BP81408 668 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 TBC1D8BQ0IIM8 1120 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 PTPROQ16827 1216 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 AAK1Q2M2I8 961 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 NAALADL2Q58DX5 795 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 SLC24A5Q71RS6 500 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 METTL13Q8N6R0 699 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 P2RX5Q93086 422 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 ZSCAN31Q96LW9 406 aaPredicted RBP13.55□□□□□ -0.24
COPB1-206ENST00000529210 OSMRQ99650 979 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 LMAN2LQ9H0V9 348 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 ELAC1Q9H777 363 aaKnown RBP13.55□□□□□ -0.24
COPB1-206ENST00000529210 MTUS1Q9ULD2 1270 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 FNDC1Q4ZHG4 1894 aaPredicted RBP13.55□□□□□ -0.24
COPB1-206ENST00000529210 BRWD1Q9NSI6 2320 aa13.55□□□□□ -0.24
COPB1-206ENST00000529210 NCOR1O75376 2440 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 BTBD18B2RXH4 712 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 MAFO75444 373 aaPredicted RBP13.54□□□□□ -0.24
COPB1-206ENST00000529210 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 NLRP11P59045 1033 aaKnown RBP13.54□□□□□ -0.24
COPB1-206ENST00000529210 NFX1Q12986 1120 aaKnown RBP13.54□□□□□ -0.24
COPB1-206ENST00000529210 COL19A1Q14993 1142 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 EPHA7Q15375 998 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 TMEM266Q2M3C6 531 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 TIGD5Q53EQ6 642 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 ANO5Q75V66 913 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 C4orf19Q8IY42 314 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 DIS3L2Q8IYB7 885 aaKnown RBP13.54□□□□□ -0.24
COPB1-206ENST00000529210 EXOC8Q8IYI6 725 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 LRRC71Q8N4P6 559 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 JPH2Q9BR39 696 aaPredicted RBP13.54□□□□□ -0.24
COPB1-206ENST00000529210 C11orf84Q9BUA3 381 aaPredicted RBP13.54□□□□□ -0.24
COPB1-206ENST00000529210 SH2B1Q9NRF2 756 aaPredicted RBP13.54□□□□□ -0.24
COPB1-206ENST00000529210 AKT3Q9Y243 479 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 KIAA1671Q9BY89 1806 aa13.54□□□□□ -0.24
COPB1-206ENST00000529210 ATG2AQ2TAZ0 1938 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.53□□□□□ -0.24
COPB1-206ENST00000529210 FAM205CA6NFA0 338 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 DTNBO60941 627 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 LYPLA2O95372 231 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 BAG4O95429 457 aaKnown RBP13.53□□□□□ -0.24
COPB1-206ENST00000529210 BMP1P13497 986 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms