RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SELPP16109 830 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 EDNRBP24530 442 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 ZNF200P98182 395 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-212ENST00000528930 INSM1Q01101 510 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-212ENST00000528930 GHRHRQ02643 423 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 PTPN11Q06124 597 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-212ENST00000528930 CAMK1Q14012 370 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 EEPD1Q7L9B9 569 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 FBXO16Q8IX29 292 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-212ENST00000528930 TMTC2Q8N394 836 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 CCDC155Q8N6L0 562 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 KDF1Q8NAX2 398 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-212ENST00000528930 DNERQ8NFT8 737 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 SYTL5Q8TDW5 730 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-212ENST00000528930 TAAR1Q96RJ0 339 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 RTP3Q9BQQ7 232 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 AMNQ9BXJ7 453 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 POLR3EQ9NVU0 708 aa9.77□□□□□ -0.85
SSBP3-212ENST00000528930 BARX2Q9UMQ3 279 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-212ENST00000528930 MRPL11Q9Y3B7 192 aaKnown RBP9.77□□□□□ -0.85
SSBP3-212ENST00000528930 CCDC69A6NI79 296 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 RXRAP19793 462 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 TGM1P22735 817 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 SMARCA1P28370 1054 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 HSPA4P34932 840 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 RING1Q06587 406 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 FAM47CQ5HY64 1035 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 IQSEC1Q6DN90 963 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 NOL8Q76FK4 1167 aaKnown RBP9.76□□□□□ -0.85
SSBP3-212ENST00000528930 DHX32Q7L7V1 743 aaKnown RBP9.76□□□□□ -0.85
SSBP3-212ENST00000528930 ADGRD2Q7Z7M1 963 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 SGMS1Q86VZ5 419 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 HOMER1Q86YM7 354 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 MCF2L2Q86YR7 1114 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 FLCNQ8NFG4 579 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 VTA1Q9NP79 307 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 PCDHA1Q9Y5I3 950 aa9.76□□□□□ -0.85
SSBP3-212ENST00000528930 SMG1Q96Q15 3661 aaKnown RBP9.76□□□□□ -0.85
SSBP3-212ENST00000528930 PNMA6FA0A0J9YX94 578 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 SLC30A4O14863 429 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 LGR5O75473 907 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 PLEKHA8P1O95397 391 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 AMHP03971 560 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 KIF5BP33176 963 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 CTNNB1P35222 781 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 HSD17B4P51659 736 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 KRT32Q14532 448 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 NFXL1Q6ZNB6 911 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 RAB11FIP4Q86YS3 637 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 MYOCDQ8IZQ8 938 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 CMTR1Q8N1G2 835 aaKnown RBP9.75□□□□□ -0.85
SSBP3-212ENST00000528930 SRBD1Q8N5C6 995 aaKnown RBP9.75□□□□□ -0.85
SSBP3-212ENST00000528930 CTCFLQ8NI51 663 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-212ENST00000528930 DHX38Q92620 1227 aaKnown RBP9.75□□□□□ -0.85
SSBP3-212ENST00000528930 PPP2R3CQ969Q6 453 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 TCEANC2Q96MN5 208 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 YME1L1Q96TA2 773 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 SPZ1Q9BXG8 430 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 NCDNQ9UBB6 729 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 BRPF3Q9ULD4 1205 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 SNX14Q9Y5W7 946 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 SLC12A7Q9Y666 1083 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 BPTFQ12830 3046 aa9.75□□□□□ -0.85
SSBP3-212ENST00000528930 EPB41L2O43491 1005 aaKnown RBP9.74□□□□□ -0.85
SSBP3-212ENST00000528930 CFBP00751 764 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 SP9P0CG40 484 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 CALM1P0DP23 149 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 CALM2P0DP24 149 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 CALM3P0DP25 149 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 CPA1P15085 419 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 MMP16P51512 607 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 PDE4DQ08499 809 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 DUSP28Q4G0W2 176 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 SAMD3Q8N6K7 520 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 FANCBQ8NB91 859 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 NSUN6Q8TEA1 469 aaKnown RBP9.74□□□□□ -0.85
SSBP3-212ENST00000528930 LZTS2Q9BRK4 669 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 MTG1Q9BT17 334 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-212ENST00000528930 USP26Q9BXU7 913 aa9.74□□□□□ -0.85
SSBP3-212ENST00000528930 MAP3K20Q9NYL2 800 aaKnown RBP9.74□□□□□ -0.85
SSBP3-212ENST00000528930 B4DLN1 442 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 REC8O95072 547 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 HMGB1P09429 215 aaKnown RBP9.73□□□□□ -0.85
SSBP3-212ENST00000528930 HOXA13P31271 388 aaPredicted RBP9.73□□□□□ -0.85
SSBP3-212ENST00000528930 BMPR1AP36894 532 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 GNAQP50148 359 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 MRPL12P52815 198 aaKnown RBP9.73□□□□□ -0.85
SSBP3-212ENST00000528930 SKOR1P84550 965 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 TRAF1Q13077 416 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 MBTPS1Q14703 1052 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 SOWAHCQ53LP3 525 aaPredicted RBP9.73□□□□□ -0.85
SSBP3-212ENST00000528930 APOA5Q6Q788 366 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 UNQ6494/PRO21346Q6UXR6 183 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 TMTC3Q6ZXV5 915 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 ATP8B4Q8TF62 1192 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 PPP1R13LQ8WUF5 828 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 PIBF1Q8WXW3 757 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 TOP1MTQ969P6 601 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 IWS1Q96ST2 819 aa9.73□□□□□ -0.85
SSBP3-212ENST00000528930 RMDN3Q96TC7 470 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms