RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 MTERF2Q49AM1 385 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 CNNM4Q6P4Q7 775 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 SLC39A5Q6ZMH5 540 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 ANO5Q75V66 913 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 ZNF410Q86VK4 478 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 SLC43A3Q8NBI5 491 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 KAT2BQ92831 832 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 GJA10Q969M2 543 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 LENG1Q96BZ8 264 aaPredicted RBP8.8□□□□□ -1
SSBP3-211ENST00000528787 DHX58Q96C10 678 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 DHX33Q9H6R0 707 aaKnown RBP8.8□□□□□ -1
SSBP3-211ENST00000528787 GDPD2Q9HCC8 539 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 HPSEQ9Y251 543 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 SQORQ9Y6N5 450 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 A0A1B0GVL5 298 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 CCDC85CA6NKD9 419 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 PITPNM1O00562 1244 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 ZNF862O60290 1169 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 FAM13AO94988 1023 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 MAPTP10636 758 aaKnown RBP8.79□□□□□ -1
SSBP3-211ENST00000528787 KLRC1P26715 233 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 HOXC8P31273 242 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 RFC2P35250 354 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 NDUFA8P51970 172 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 GRB10Q13322 594 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 STIM1Q13586 685 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 TARBP2Q15633 366 aaKnown RBP8.79□□□□□ -1
SSBP3-211ENST00000528787 SPECC1Q5M775 1068 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 EFCAB12Q6NXP0 572 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 MTHFD1LQ6UB35 978 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 KRBA2Q6ZNG9 492 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 GPBP1Q86WP2 473 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 ZBTB8OSQ8IWT0 167 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 METTL13Q8N6R0 699 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 PDILTQ8N807 584 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 LMBR1Q8WVP7 490 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 PAWRQ96IZ0 340 aaKnown RBP8.79□□□□□ -1
SSBP3-211ENST00000528787 GSDMAQ96QA5 445 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 UIMC1Q96RL1 719 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 PCYT2Q99447 389 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 MMTAG2Q9BU76 263 aaKnown RBP8.79□□□□□ -1
SSBP3-211ENST00000528787 RNPEPQ9H4A4 650 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 PARVGQ9HBI0 331 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 KBTBD4Q9NVX7 518 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 HDAC6Q9UBN7 1215 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 DACH1Q9UI36 760 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 NR2E3Q9Y5X4 410 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 EVPLQ92817 2033 aa8.79□□□□□ -1
SSBP3-211ENST00000528787 MYADML2A6NDP7 307 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 PP2D1A8MPX8 630 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 GTPBP6O43824 516 aaPredicted RBP8.78□□□□□ -1
SSBP3-211ENST00000528787 PFKMP08237 780 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 CYP2C9P11712 490 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 PRKCSHP14314 528 aaPredicted RBP8.78□□□□□ -1
SSBP3-211ENST00000528787 CDC25AP30304 524 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 NAMPTP43490 491 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 PHKA2P46019 1235 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 CDK7P50613 346 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 SLC12A3P55017 1021 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 IGBP1P78318 339 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 STRN3Q13033 797 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 E2F4Q16254 413 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 UGCGQ16739 394 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 COL13A1Q5TAT6 717 aaPredicted RBP8.78□□□□□ -1
SSBP3-211ENST00000528787 RINT1Q6NUQ1 792 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 SERINC5Q86VE9 423 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 TRIM50Q86XT4 487 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 FMR1NBQ8N0W7 255 aaPredicted RBP8.78□□□□□ -1
SSBP3-211ENST00000528787 TRIML1Q8N9V2 468 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 PIGOQ8TEQ8 1089 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 SCLT1Q96NL6 688 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 PNMA5Q96PV4 448 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 C7orf25Q9BPX7 421 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 NFKBIZQ9BYH8 718 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 GCOM2Q9BZD3 368 aaPredicted RBP8.78□□□□□ -1
SSBP3-211ENST00000528787 BCAS3Q9H6U6 928 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 SUGCTQ9HAC7 445 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 LMBRD1Q9NUN5 540 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 EXOC7Q9UPT5 735 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 AKT3Q9Y243 479 aa8.78□□□□□ -1
SSBP3-211ENST00000528787 IGKV6-21A0A0C4DH24 114 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 E9PMD0 336 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 EVI5O60447 810 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 USO1O60763 962 aaKnown RBP8.77□□□□□ -1.01
SSBP3-211ENST00000528787 EFCAB14O75071 495 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 C22orf31O95567 290 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 CLTBP09497 229 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 PLS3P13797 630 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 ATP4AP20648 1035 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 SFPQP23246 707 aaKnown RBP eCLIP8.77□□□□□ -1.01
SSBP3-211ENST00000528787 SNRPFP62306 86 aaKnown RBP8.77□□□□□ -1.01
SSBP3-211ENST00000528787 ASIC1P78348 528 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 GRIN1Q05586 938 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 RBL2Q08999 1139 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 MCM6Q14566 821 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 POSTNQ15063 836 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 KLHL40Q2TBA0 621 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 CT47A1Q5JQC4 288 aaPredicted RBP8.77□□□□□ -1.01
SSBP3-211ENST00000528787 TMEM63BQ5T3F8 832 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 FAM102BQ5T8I3 360 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms