RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
USF1-208ENST00000528768 FCER1AP12319 257 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 TRIM21P19474 475 aaKnown RBP12.97□□□□□ -0.33
USF1-208ENST00000528768 MUTP22033 750 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 CYLC1P35663 651 aaPredicted RBP12.97□□□□□ -0.33
USF1-208ENST00000528768 PPIGQ13427 754 aaKnown RBP eCLIP12.97□□□□□ -0.335e-6■■■□□ 19.2
USF1-208ENST00000528768 RAB30Q15771 203 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 MAN2A1Q16706 1144 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 PTPN21Q16825 1174 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 PPP4R3CPQ6ZMV5 832 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 TOGARAM2Q6ZUX3 1019 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 GPBP1Q86WP2 473 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 IRF2BP1Q8IU81 584 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 ABRAQ8N0Z2 381 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 SAMD3Q8N6K7 520 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 ZNF507Q8TCN5 953 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 PPM1EQ8WY54 764 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 CEP63Q96MT8 703 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 ERGIC2Q96RQ1 377 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 KIAA1683Q9H0B3 1180 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 HOXC10Q9NYD6 342 aa12.97□□□□□ -0.33
USF1-208ENST00000528768 CXXC1Q9P0U4 656 aaPredicted RBP12.97□□□□□ -0.33
USF1-208ENST00000528768 SOWAHDA6NJG2 315 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 B4DLN1 442 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 RARBP10826 455 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 ITGB8P26012 769 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 RPA1P27694 616 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 ADORA2AP29274 412 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 PMS1P54277 932 aaKnown RBP12.96□□□□□ -0.33
USF1-208ENST00000528768 EPHB4P54760 987 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 ZBED6P86452 979 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 FKBP3Q00688 224 aaKnown RBP12.96□□□□□ -0.33
USF1-208ENST00000528768 COASYQ13057 564 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 VWA3BQ502W6 1294 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 FAM83BQ5T0W9 1011 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 NCAPH2Q6IBW4 605 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 TRIM65Q6PJ69 517 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 ANKRD33Q7Z3H0 272 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 CCDC170Q8IYT3 715 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 KIAA0895Q8NCT3 520 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 EHBP1Q8NDI1 1231 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 LRRC15Q8TF66 581 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 CRYGNQ8WXF5 182 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 TSEN34Q9BSV6 310 aaKnown RBP12.96□□□□□ -0.33
USF1-208ENST00000528768 POLR3CQ9BUI4 534 aaPredicted RBP12.96□□□□□ -0.33
USF1-208ENST00000528768 EDEM3Q9BZQ6 932 aa12.96□□□□□ -0.33
USF1-208ENST00000528768 RANBP17Q9H2T7 1088 aaKnown RBP12.96□□□□□ -0.33
USF1-208ENST00000528768 ARGLU1Q9NWB6 273 aaPredicted RBP12.96□□□□□ -0.33
USF1-208ENST00000528768 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
USF1-208ENST00000528768 MROH7Q68CQ1 1323 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 A0A1W2PRG0 241 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 SPDYE16A6NNV3 312 aaPredicted RBP12.95□□□□□ -0.34
USF1-208ENST00000528768 TIMP1P01033 207 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 VCAM1P19320 739 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 JAG1P78504 1218 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 SETQ01105 290 aaPredicted RBP12.95□□□□□ -0.34
USF1-208ENST00000528768 NCBP1Q09161 790 aaKnown RBP12.95□□□□□ -0.34
USF1-208ENST00000528768 CCDC40Q4G0X9 1142 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 HERC4Q5GLZ8 1057 aaPredicted RBP12.95□□□□□ -0.34
USF1-208ENST00000528768 RAD9BQ6WBX8 426 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 MCF2L2Q86YR7 1114 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 SPICE1Q8N0Z3 855 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 ETNPPLQ8TBG4 499 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 UBXN4Q92575 508 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 KIFC2Q96AC6 838 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 DNAJC7Q99615 494 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 WDR11Q9BZH6 1224 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 NUCKS1Q9H1E3 243 aaKnown RBP12.95□□□□□ -0.34
USF1-208ENST00000528768 MTIF3Q9H2K0 278 aaKnown RBP12.95□□□□□ -0.34
USF1-208ENST00000528768 PRDM12Q9H4Q4 367 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 MROH8Q9H579 483 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 TUFT1Q9NNX1 390 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 XPNPEP3Q9NQH7 507 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 BTBD7Q9P203 1132 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 MSRAQ9UJ68 235 aa12.95□□□□□ -0.34
USF1-208ENST00000528768 CTDP1Q9Y5B0 961 aaPredicted RBP12.95□□□□□ -0.34
USF1-208ENST00000528768 EPN1Q9Y6I3 576 aaPredicted RBP12.95□□□□□ -0.34
USF1-208ENST00000528768 TTC26A0AVF1 554 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 PQBP1O60828 265 aaKnown RBP12.94□□□□□ -0.34
USF1-208ENST00000528768 TBCAO75347 108 aaKnown RBP12.94□□□□□ -0.34
USF1-208ENST00000528768 CFBP00751 764 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 FDX1P10109 184 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 GAP43P17677 238 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 SNAP25P60880 206 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 CDK17Q00537 523 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 PPP2R3AQ06190 1150 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 EHHADHQ08426 723 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 SHROOM1Q2M3G4 852 aaPredicted RBP12.94□□□□□ -0.34
USF1-208ENST00000528768 RASIP1Q5U651 963 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 MFSD5Q6N075 450 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 PSRC1Q6PGN9 363 aaPredicted RBP12.94□□□□□ -0.34
USF1-208ENST00000528768 STXBP4Q6ZWJ1 553 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 SYT2Q8N9I0 419 aaPredicted RBP12.94□□□□□ -0.34
USF1-208ENST00000528768 ACER1Q8TDN7 264 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 DNAJC19Q96DA6 116 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 DESI2Q9BSY9 194 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 PBX4Q9BYU1 374 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 NDST4Q9H3R1 872 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 HAUS4Q9H6D7 363 aa12.94□□□□□ -0.34
USF1-208ENST00000528768 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms