RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 BLZF1Q9H2G9 400 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 POLD4Q9HCU8 107 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 PDLIM7Q9NR12 457 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 BMP2KQ9NSY1 1161 aaPredicted RBP13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 TMEM63CQ9P1W3 806 aa13.52□□□□□ -0.25
TRAF3IP2-211ENST00000528599 HOXC8P31273 242 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 RAD51AP2Q09MP3 1159 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 PNOCQ13519 176 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ITGA7Q13683 1181 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 POSTNQ15063 836 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 KANK3Q6NY19 840 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 DYMQ7RTS9 669 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ELOA2Q8IYF1 753 aaPredicted RBP13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 C7orf31Q8N865 590 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 LMBR1Q8WVP7 490 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 DDX12PQ92771 950 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ERCC4Q92889 916 aaPredicted RBP13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 C7orf25Q9BPX7 421 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 TRIM9Q9C026 710 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 DHX33Q9H6R0 707 aaKnown RBP13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 XPNPEP1Q9NQW7 623 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 COL1A2P08123 1366 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 NRCAMQ92823 1304 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 LOXHD1Q8IVV2 1947 aa13.51□□□□□ -0.25
TRAF3IP2-211ENST00000528599 GTPBP6O43824 516 aaPredicted RBP13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 MAFO75444 373 aaPredicted RBP13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 DGAT1O75907 488 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 C22orf31O95567 290 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 KLRC1P26715 233 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 RFC5P40937 340 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ADAM17P78536 824 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ZNF200P98182 395 aaPredicted RBP13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 AMPD3Q01432 767 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 MLLT1Q03111 559 aaPredicted RBP13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 TBC1D8BQ0IIM8 1120 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CAVIN1Q6NZI2 390 aaKnown RBP13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 MAEAQ7L5Y9 396 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 DNAJC19Q96DA6 116 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 NUP62CLQ9H1M0 184 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 STARD7Q9NQZ5 370 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 PPME1Q9Y570 386 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 IGKV6-21A0A0C4DH24 114 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 RRN3P2A6NIE6 340 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 GUCY2CP25092 1073 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 DPYDQ12882 1025 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 MAPK7Q13164 816 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 GIT2Q14161 759 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 EMC2Q15006 297 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 FAM47CQ5HY64 1035 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 GDF6Q6KF10 455 aaPredicted RBP13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CNNM4Q6P4Q7 775 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 NFRKBQ6P4R8 1299 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 MTHFD1LQ6UB35 978 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 SESTD1Q86VW0 696 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 DAW1Q8N136 415 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 SLC43A3Q8NBI5 491 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 REEP2Q9BRK0 252 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 LRRC27Q9C0I9 530 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 GPRC5CQ9NQ84 441 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 KCND2Q9NZV8 630 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 GTF2IRD1Q9UHL9 959 aa13.5□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CEP290O15078 2479 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 C17orf102A2RUQ5 167 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 MBLAC1A4D2B0 266 aaPredicted RBP13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 RSPH10B2B2RC85 870 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 KRT18P05783 430 aaKnown RBP13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 RSPH10BP0C881 870 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 DRP2Q13474 957 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CCDC183Q5T5S1 534 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 NECAB2Q7Z6G3 386 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 LRRC71Q8N4P6 559 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 SLC7A3Q8WY07 619 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 TMEM143Q96AN5 459 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CCDC34Q96HJ3 373 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 SENP6Q9GZR1 1112 aaPredicted RBP13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 C11orf49Q9H6J7 331 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ATP6V0A4Q9HBG4 840 aa13.49□□□□□ -0.25
TRAF3IP2-211ENST00000528599 A0A0U1RQG5 324 aaPredicted RBP13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 SFI1A8K8P3 1242 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 MAGEB2O15479 319 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 TREHO43280 583 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 KLRC4O43908 158 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 HIP1RO75146 1068 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 MYL1P05976 194 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ASIC1P78348 528 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 EFCAB12Q6NXP0 572 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 LINC01465Q8N7H1 131 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 MCPH1Q8NEM0 835 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CTAGE1Q96RT6 745 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 SUGCTQ9HAC7 445 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 HOOK1Q9UJC3 728 aaKnown RBP13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 TUBE1Q9UJT0 475 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 PCDHA5Q9Y5H7 936 aa13.48□□□□□ -0.25
TRAF3IP2-211ENST00000528599 FSD2A1L4K1 749 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ARVCFO00192 962 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 GNAT1P11488 350 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CDK7P50613 346 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms