RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 RBM26Q5T8P6 1007 aaKnown RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 UHMK1Q8TAS1 419 aaKnown RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 UBLCP1Q8WVY7 318 aaPredicted RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 CRYGNQ8WXF5 182 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 SYN2Q92777 582 aaPredicted RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 ZDHHC15Q96MV8 337 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 NUCKS1Q9H1E3 243 aaKnown RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 LTBP4Q8N2S1 1624 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 NHSQ6T4R5 1651 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 NPR1P16066 1061 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 SREBF1P36956 1147 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 DLG4P78352 724 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 PDE4CQ08493 712 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 DRAP1Q14919 205 aaPredicted RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 EPM2AIP1Q7L775 607 aaPredicted RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 FRMD5Q7Z6J6 570 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 CPNE8Q86YQ8 564 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 ARHGEF26Q96DR7 871 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 SH3GL2Q99962 352 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 QTRT2Q9H974 415 aaKnown RBP8.13□□□□□ -1.11
C11orf54-207ENST00000528288 TMOD4Q9NZQ9 345 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 DNAJC12Q9UKB3 198 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 PPP1R9AQ9ULJ8 1098 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 TRAF3IP3Q9Y228 551 aa8.13□□□□□ -1.11
C11orf54-207ENST00000528288 MYO3BQ8WXR4 1341 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 GOLGA8KD6RF30 607 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 RPS6KA5O75582 802 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 CALCAP01258 141 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 H2AFZP0C0S5 128 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 MARSP56192 900 aaKnown RBP8.12□□□□□ -1.11
C11orf54-207ENST00000528288 DACT2Q5SW24 774 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 ODR4Q5SWX8 454 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 TMEM179Q6ZVK1 233 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 H2AFVQ71UI9 128 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 IQCKQ8N0W5 287 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 HOMER2Q9NSB8 354 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 TYW1Q9NV66 732 aaKnown RBP8.12□□□□□ -1.11
C11orf54-207ENST00000528288 SMIM23A6NLE4 172 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 PDXKO00764 312 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 NDUFAB1O14561 156 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 EIF3HO15372 352 aaKnown RBP eCLIP8.12□□□□□ -1.11
C11orf54-207ENST00000528288 BUB1BO60566 1050 aaPredicted RBP8.12□□□□□ -1.11
C11orf54-207ENST00000528288 ITIH3Q06033 890 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 AP3B2Q13367 1082 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 SYCP3Q8IZU3 236 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 LRRC57Q8N9N7 239 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 SLC20A1Q8WUM9 679 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 CAVIN3Q969G5 261 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 MKL1Q969V6 931 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.12□□□□□ -1.11
C11orf54-207ENST00000528288 VEZTQ9HBM0 779 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 PPANQ9NQ55 473 aaKnown RBP8.12□□□□□ -1.11
C11orf54-207ENST00000528288 ZBTB12Q9Y330 459 aaPredicted RBP8.12□□□□□ -1.11
C11orf54-207ENST00000528288 PCNTO95613 3336 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 ZMYM2Q9UBW7 1377 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 PITPNM2Q9BZ72 1349 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 GOLGA8IPA6NC78 632 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 GOLGA8JA6NMD2 632 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 DCDC2CA8MYV0 355 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 ATMINO43313 823 aaPredicted RBP8.12□□□□□ -1.11
C11orf54-207ENST00000528288 GAS7O60861 476 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 RAD17O75943 681 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 FGGP02679 453 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 TMOD1P28289 359 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 TNNC1P63316 161 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 Q4G0T1 1027 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 SLC35G2Q8TBE7 412 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 GLG1Q92896 1179 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 KAT5Q92993 513 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 MBOAT7Q96N66 472 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 FAM169AQ9Y6X4 670 aa8.12□□□□□ -1.11
C11orf54-207ENST00000528288 IGLV3-22A0A075B6J6 115 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 KLRG2A4D1S0 409 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-207ENST00000528288 EBAG9O00559 213 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 SORBS3O60504 671 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 FLOT1O75955 427 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 EYA4O95677 639 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 HSD17B3P37058 310 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 OTOP1Q7RTM1 612 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 PHLDB2Q86SQ0 1253 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 FAM178BQ8IXR5 827 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 THAP2Q9H0W7 228 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 UNC45AQ9H3U1 944 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 FBXL5Q9UKA1 691 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 EXOC3O60645 756 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 SHOX2O60902 331 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-207ENST00000528288 RPL13P26373 211 aaKnown RBP8.11□□□□□ -1.11
C11orf54-207ENST00000528288 CORO7P57737 925 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 UAP1Q16222 522 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-207ENST00000528288 UBAP2Q5T6F2 1119 aaKnown RBP8.11□□□□□ -1.11
C11orf54-207ENST00000528288 ALS2CLQ60I27 953 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 PPP4R3CPQ6ZMV5 832 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 CPXCR1Q8N123 301 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 SUGT1Q9Y2Z0 365 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 FOXN3O00409 490 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-207ENST00000528288 NR1D1P20393 614 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 ECHS1P30084 290 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 ALDH1B1P30837 517 aa8.11□□□□□ -1.11
C11orf54-207ENST00000528288 STAT1P42224 750 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms