RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 ATP4AP20648 1035 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 MARCKSP29966 332 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 NASPP49321 788 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 KRT76Q01546 638 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 SPIRE1Q08AE8 756 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 PPP2R5CQ13362 524 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 MBTPS1Q14703 1052 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 STK38Q15208 465 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 IL17AQ16552 155 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 TRIM71Q2Q1W2 868 aaKnown RBP12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 ZNF746Q6NUN9 644 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 TRAF7Q6Q0C0 670 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 TRMT1LQ7Z2T5 733 aaKnown RBP12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 MIER3Q7Z3K6 550 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 TMCO2Q7Z6W1 182 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 SUGCTQ9HAC7 445 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 GTF2IRD1Q9UHL9 959 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 CEP131Q9UPN4 1083 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 FAM186AA6NE01 2351 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 MYH11P35749 1972 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 VWA3AA6NCI4 1184 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 WDR64B1ANS9 1081 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 H3BRB1 525 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 LAD1O00515 517 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 SUPT20HL2P0C7V6 817 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 PRPHP41219 470 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 TECP42680 631 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 IGBP1P78318 339 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 GRIN1Q05586 938 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 TCF15Q12870 199 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 PTGISQ16647 500 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 TMEM266Q2M3C6 531 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 NFRKBQ6P4R8 1299 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 B3GNT9Q6UX72 402 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 NEK9Q8TD19 979 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 LMBR1Q8WVP7 490 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 TUT1Q9H6E5 874 aaKnown RBP12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 FAM86C1Q9NVL1 165 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 PCDHA12Q9UN75 941 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 SAMM50Q9Y512 469 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 ATP6V1DQ9Y5K8 247 aa12.96□□□□□ -0.33
CCDC90B-210ENST00000528149 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 PP2D1A8MPX8 630 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 BACH1O14867 736 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 PPFIA4O75335 1185 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 LGR5O75473 907 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 YEATS4O95619 227 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 HOXC8P31273 242 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 JAK3P52333 1124 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 KRT85P78386 507 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 C1QBPQ07021 282 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 SLC39A14Q15043 492 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 PUS10Q3MIT2 529 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 BRDTQ58F21 947 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 MARCH8Q5T0T0 291 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 MIS18BP1Q6P0N0 1132 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 ABHD15Q6UXT9 468 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 SMAP1Q8IYB5 467 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 C7orf31Q8N865 590 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 LINC00301Q8NCQ3 95 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 SEPT1Q8WYJ6 367 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 GDPD2Q9HCC8 539 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 DISC1Q9NRI5 854 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 MUTYHQ9UIF7 546 aa12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 FBXO2Q9UK22 296 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-210ENST00000528149 EMSYQ7Z589 1322 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 IGSF9BQ9UPX0 1349 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 DMDP11532 3685 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 KMT2EQ8IZD2 1858 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 SPTLC2O15270 562 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 ZNF862O60290 1169 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 KPNA6O60684 536 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 ATG7O95352 703 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 PSAPP07602 524 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 CTSHP09668 335 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 SFNP31947 248 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 RFC2P35250 354 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 IRS1P35568 1242 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 CYP4A11Q02928 519 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 PLCB4Q15147 1175 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 ARL6IP4Q66PJ3 421 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 ATL3Q6DD88 541 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 DTHD1Q6ZMT9 781 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 SESTD1Q86VW0 696 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 BANK1Q8NDB2 785 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 CLIC6Q96NY7 704 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 SH2D3AQ9BRG2 576 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 WRAP73Q9P2S5 460 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 GABBR1Q9UBS5 961 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 PCDHA10Q9Y5I2 948 aa12.94□□□□□ -0.34
CCDC90B-210ENST00000528149 EPG5Q9HCE0 2579 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 CACNA1GO43497 2377 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 IGKV6D-21A0A0A0MT36 114 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 C17orf102A2RUQ5 167 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 ZBTB42B2RXF5 422 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 CDC25AP30304 524 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 ADAM17P78536 824 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms