RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 SCLT1Q96NL6 688 aa21.7■■□□□ 1.06
CAPN1-211ENST00000527739 ST3GAL5Q9UNP4 418 aa21.7■■□□□ 1.06
CAPN1-211ENST00000527739 DDX11L8A8MPP1 907 aa21.69■■□□□ 1.06
CAPN1-211ENST00000527739 GPR182O15218 404 aa21.69■■□□□ 1.06
CAPN1-211ENST00000527739 FDPSP14324 419 aaKnown RBP21.69■■□□□ 1.06
CAPN1-211ENST00000527739 KRT2P35908 639 aa21.69■■□□□ 1.06
CAPN1-211ENST00000527739 TBC1D8BQ0IIM8 1120 aa21.69■■□□□ 1.06
CAPN1-211ENST00000527739 TRIM29Q14134 588 aa21.69■■□□□ 1.06
CAPN1-211ENST00000527739 MTERF2Q49AM1 385 aa21.69■■□□□ 1.06
CAPN1-211ENST00000527739 NPAS4Q8IUM7 802 aa21.69■■□□□ 1.06
CAPN1-211ENST00000527739 TMEM40Q8WWA1 233 aa21.69■■□□□ 1.06
CAPN1-211ENST00000527739 ZNF668Q96K58 619 aaPredicted RBP21.69■■□□□ 1.06
CAPN1-211ENST00000527739 TMX1Q9H3N1 280 aa21.69■■□□□ 1.06
CAPN1-211ENST00000527739 ERVK-5Q9HDB9 667 aa21.69■■□□□ 1.06
CAPN1-211ENST00000527739 SEPT9Q9UHD8 586 aaPredicted RBP21.69■■□□□ 1.06
CAPN1-211ENST00000527739 ADGRA3Q8IWK6 1321 aa21.69■■□□□ 1.06
CAPN1-211ENST00000527739 MICAL3Q7RTP6 2002 aa21.68■■□□□ 1.06
CAPN1-211ENST00000527739 JAK2O60674 1132 aa21.68■■□□□ 1.06
CAPN1-211ENST00000527739 DGKIO75912 1065 aa21.68■■□□□ 1.06
CAPN1-211ENST00000527739 GCFC2P16383 781 aaKnown RBP21.68■■□□□ 1.06
CAPN1-211ENST00000527739 NLRP11P59045 1033 aaKnown RBP21.68■■□□□ 1.06
CAPN1-211ENST00000527739 NR5A1Q13285 461 aa21.68■■□□□ 1.06
CAPN1-211ENST00000527739 PAN2Q504Q3 1202 aaKnown RBP21.68■■□□□ 1.06
CAPN1-211ENST00000527739 XKR3Q5GH77 459 aa21.68■■□□□ 1.06
CAPN1-211ENST00000527739 BANK1Q8NDB2 785 aa21.68■■□□□ 1.06
CAPN1-211ENST00000527739 NSUN7Q8NE18 718 aaKnown RBP21.68■■□□□ 1.06
CAPN1-211ENST00000527739 NAP1L4Q99733 375 aaKnown RBP21.68■■□□□ 1.06
CAPN1-211ENST00000527739 ADAM2Q99965 735 aa21.68■■□□□ 1.06
CAPN1-211ENST00000527739 SH2D3AQ9BRG2 576 aa21.68■■□□□ 1.06
CAPN1-211ENST00000527739 PCDHB7Q9Y5E2 793 aa21.68■■□□□ 1.06
CAPN1-211ENST00000527739 SIP14410 1827 aa21.67■■□□□ 1.06
CAPN1-211ENST00000527739 H3BNC9 293 aa21.67■■□□□ 1.06
CAPN1-211ENST00000527739 GPR32O75388 356 aa21.67■■□□□ 1.06
CAPN1-211ENST00000527739 BMPR1AP36894 532 aa21.67■■□□□ 1.06
CAPN1-211ENST00000527739 EARS2Q5JPH6 523 aaKnown RBP21.67■■□□□ 1.06
CAPN1-211ENST00000527739 PPP4R3AQ6IN85 833 aa21.67■■□□□ 1.06
CAPN1-211ENST00000527739 MRPL38Q96DV4 380 aaKnown RBP21.67■■□□□ 1.06
CAPN1-211ENST00000527739 FAM20AQ96MK3 541 aa21.67■■□□□ 1.06
CAPN1-211ENST00000527739 C1QTNF1Q9BXJ1 281 aa21.67■■□□□ 1.06
CAPN1-211ENST00000527739 TMEM150BA6NC51 233 aa21.66■■□□□ 1.06
CAPN1-211ENST00000527739 FAM205CA6NFA0 338 aa21.66■■□□□ 1.06
CAPN1-211ENST00000527739 MGEA5O60502 916 aa21.66■■□□□ 1.06
CAPN1-211ENST00000527739 CSPG5O95196 566 aa21.66■■□□□ 1.06
CAPN1-211ENST00000527739 ZNF689Q96CS4 500 aaPredicted RBP21.66■■□□□ 1.06
CAPN1-211ENST00000527739 CD320Q9NPF0 282 aa21.66■■□□□ 1.06
CAPN1-211ENST00000527739 RWDD3Q9Y3V2 267 aa21.66■■□□□ 1.06
CAPN1-211ENST00000527739 EML1O00423 815 aa21.65■■□□□ 1.06
CAPN1-211ENST00000527739 BAG4O95429 457 aaKnown RBP21.65■■□□□ 1.06
CAPN1-211ENST00000527739 SARSP49591 514 aaKnown RBP21.65■■□□□ 1.06
CAPN1-211ENST00000527739 GATMP50440 423 aa21.65■■□□□ 1.06
CAPN1-211ENST00000527739 PSMC5P62195 406 aa21.65■■□□□ 1.06
CAPN1-211ENST00000527739 B3GNT9Q6UX72 402 aa21.65■■□□□ 1.06
CAPN1-211ENST00000527739 FAM228AQ86W67 206 aa21.65■■□□□ 1.06
CAPN1-211ENST00000527739 NLRP7Q8WX94 980 aa21.65■■□□□ 1.06
CAPN1-211ENST00000527739 LIMCH1Q9UPQ0 1083 aa21.65■■□□□ 1.06
CAPN1-211ENST00000527739 RB1P06400 928 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 DNM2P50570 870 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 SPOUT1Q5T280 376 aaKnown RBP21.64■■□□□ 1.05
CAPN1-211ENST00000527739 NCAPH2Q6IBW4 605 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 EP400NLQ6ZTU2 488 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 SLC24A5Q71RS6 500 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 POTEDQ86YR6 584 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 CCDC83Q8IWF9 413 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 CMTR2Q8IYT2 770 aaKnown RBP21.64■■□□□ 1.05
CAPN1-211ENST00000527739 LRFN3Q9BTN0 628 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 C11orf84Q9BUA3 381 aaPredicted RBP21.64■■□□□ 1.05
CAPN1-211ENST00000527739 NIFKQ9BYG3 293 aaKnown RBP21.64■■□□□ 1.05
CAPN1-211ENST00000527739 ADAMTS10Q9H324 1103 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 UBE2ZQ9H832 354 aaPredicted RBP21.64■■□□□ 1.05
CAPN1-211ENST00000527739 KCNMB3Q9NPA1 279 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 RGS18Q9NS28 235 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 C1orf112Q9NSG2 853 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 MRPL42Q9Y6G3 142 aaKnown RBP21.64■■□□□ 1.05
CAPN1-211ENST00000527739 BRWD1Q9NSI6 2320 aa21.64■■□□□ 1.05
CAPN1-211ENST00000527739 BTBD18B2RXH4 712 aa21.63■■□□□ 1.05
CAPN1-211ENST00000527739 MMP1P03956 469 aa21.63■■□□□ 1.05
CAPN1-211ENST00000527739 ZSCAN20P17040 1043 aaPredicted RBP21.63■■□□□ 1.05
CAPN1-211ENST00000527739 PLA2G5P39877 138 aa21.63■■□□□ 1.05
CAPN1-211ENST00000527739 QARSP47897 775 aaKnown RBP21.63■■□□□ 1.05
CAPN1-211ENST00000527739 PPP2R5CQ13362 524 aa21.63■■□□□ 1.05
CAPN1-211ENST00000527739 TARBP2Q15633 366 aaKnown RBP21.63■■□□□ 1.05
CAPN1-211ENST00000527739 DIS3L2Q8IYB7 885 aaKnown RBP21.63■■□□□ 1.05
CAPN1-211ENST00000527739 LINC01465Q8N7H1 131 aa21.63■■□□□ 1.05
CAPN1-211ENST00000527739 HAS1Q92839 578 aa21.63■■□□□ 1.05
CAPN1-211ENST00000527739 RC3H2Q9HBD1 1191 aaKnown RBP21.63■■□□□ 1.05
CAPN1-211ENST00000527739 RNF216Q9NWF9 866 aaPredicted RBP21.63■■□□□ 1.05
CAPN1-211ENST00000527739 VAV3Q9UKW4 847 aa21.63■■□□□ 1.05
CAPN1-211ENST00000527739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.62■■□□□ 1.05
CAPN1-211ENST00000527739 TBKBP1A7MCY6 615 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 TBX3O15119 743 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 GRM6O15303 877 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 DKC1O60832 514 aaKnown RBP eCLIP21.62■■□□□ 1.05
CAPN1-211ENST00000527739 STBD1O95210 358 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 ATP2B1P20020 1258 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 EIF4BP23588 611 aaKnown RBP21.62■■□□□ 1.05
CAPN1-211ENST00000527739 GPC3P51654 580 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 GUCY1B3Q02153 619 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 DRP2Q13474 957 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 TIGD5Q53EQ6 642 aa21.62■■□□□ 1.05
CAPN1-211ENST00000527739 PLA2G4FQ68DD2 849 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms