RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 TBX3O15119 743 aa18.11■□□□□ 0.49
CTSB-213ENST00000527215 NFX1Q12986 1120 aaKnown RBP18.11■□□□□ 0.49
CTSB-213ENST00000527215 PPP2R5CQ13362 524 aa18.11■□□□□ 0.49
CTSB-213ENST00000527215 SKIV2LQ15477 1246 aaKnown RBP18.11■□□□□ 0.49
CTSB-213ENST00000527215 KIZQ2M2Z5 673 aa18.11■□□□□ 0.49
CTSB-213ENST00000527215 LINC01465Q8N7H1 131 aa18.11■□□□□ 0.49
CTSB-213ENST00000527215 ADAMTS19Q8TE59 1207 aa18.11■□□□□ 0.49
CTSB-213ENST00000527215 HAS1Q92839 578 aa18.11■□□□□ 0.49
CTSB-213ENST00000527215 ZSCAN31Q96LW9 406 aaPredicted RBP18.11■□□□□ 0.49
CTSB-213ENST00000527215 OSMRQ99650 979 aa18.11■□□□□ 0.49
CTSB-213ENST00000527215 TMX1Q9H3N1 280 aa18.11■□□□□ 0.49
CTSB-213ENST00000527215 NOC2LQ9Y3T9 749 aaKnown RBP18.11■□□□□ 0.49
CTSB-213ENST00000527215 TMEM150BA6NC51 233 aa18.1■□□□□ 0.49
CTSB-213ENST00000527215 MARCH6O60337 910 aa18.1■□□□□ 0.49
CTSB-213ENST00000527215 RPS6KA5O75582 802 aa18.1■□□□□ 0.49
CTSB-213ENST00000527215 STBD1O95210 358 aa18.1■□□□□ 0.49
CTSB-213ENST00000527215 TMOD1P28289 359 aa18.1■□□□□ 0.49
CTSB-213ENST00000527215 CRYBB1P53674 252 aaPredicted RBP18.1■□□□□ 0.49
CTSB-213ENST00000527215 TARBP2Q15633 366 aaKnown RBP18.1■□□□□ 0.49
CTSB-213ENST00000527215 MTERF2Q49AM1 385 aa18.1■□□□□ 0.49
CTSB-213ENST00000527215 XKR3Q5GH77 459 aa18.1■□□□□ 0.49
CTSB-213ENST00000527215 FBXO22Q8NEZ5 403 aa18.1■□□□□ 0.49
CTSB-213ENST00000527215 MAP7D2Q96T17 732 aa18.1■□□□□ 0.49
CTSB-213ENST00000527215 LLPHQ9BRT6 129 aaKnown RBP18.1■□□□□ 0.49
CTSB-213ENST00000527215 NIFKQ9BYG3 293 aaKnown RBP18.1■□□□□ 0.49
CTSB-213ENST00000527215 ERVK-5Q9HDB9 667 aa18.1■□□□□ 0.49
CTSB-213ENST00000527215 AKT3Q9Y243 479 aa18.1■□□□□ 0.49
CTSB-213ENST00000527215 GPR32O75388 356 aa18.09■□□□□ 0.49
CTSB-213ENST00000527215 PSMC5P62195 406 aa18.09■□□□□ 0.49
CTSB-213ENST00000527215 GUCY1B3Q02153 619 aa18.09■□□□□ 0.49
CTSB-213ENST00000527215 TBC1D8BQ0IIM8 1120 aa18.09■□□□□ 0.49
CTSB-213ENST00000527215 UHRF1Q96T88 793 aaPredicted RBP18.09■□□□□ 0.49
CTSB-213ENST00000527215 SH2D3AQ9BRG2 576 aa18.09■□□□□ 0.49
CTSB-213ENST00000527215 RC3H2Q9HBD1 1191 aaKnown RBP18.09■□□□□ 0.49
CTSB-213ENST00000527215 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
CTSB-213ENST00000527215 SPTBN5Q9NRC6 3674 aaKnown RBP18.09■□□□□ 0.49
CTSB-213ENST00000527215 ADGRA3Q8IWK6 1321 aa18.08■□□□□ 0.49
CTSB-213ENST00000527215 DDX11L8A8MPP1 907 aa18.08■□□□□ 0.48
CTSB-213ENST00000527215 WNT7AO00755 349 aa18.08■□□□□ 0.48
CTSB-213ENST00000527215 MGEA5O60502 916 aa18.08■□□□□ 0.48
CTSB-213ENST00000527215 BAG4O95429 457 aaKnown RBP18.08■□□□□ 0.48
CTSB-213ENST00000527215 NLRP11P59045 1033 aaKnown RBP18.08■□□□□ 0.48
CTSB-213ENST00000527215 EPC2Q52LR7 807 aa18.08■□□□□ 0.48
CTSB-213ENST00000527215 ODR4Q5SWX8 454 aa18.08■□□□□ 0.48
CTSB-213ENST00000527215 FAM228AQ86W67 206 aa18.08■□□□□ 0.48
CTSB-213ENST00000527215 C8orf76Q96K31 380 aa18.08■□□□□ 0.48
CTSB-213ENST00000527215 SAMD11Q96NU1 681 aa18.08■□□□□ 0.48
CTSB-213ENST00000527215 CEP89Q96ST8 783 aa18.08■□□□□ 0.48
CTSB-213ENST00000527215 ST3GAL5Q9UNP4 418 aa18.08■□□□□ 0.48
CTSB-213ENST00000527215 TCF20Q9UGU0 1960 aaKnown RBP18.08■□□□□ 0.48
CTSB-213ENST00000527215 PLXNA4Q9HCM2 1894 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 GPR182O15218 404 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 DGKIO75912 1065 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 QARSP47897 775 aaKnown RBP18.07■□□□□ 0.48
CTSB-213ENST00000527215 SPIRE1Q08AE8 756 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 RABEP1Q15276 862 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 PLA2G4FQ68DD2 849 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 NCAPH2Q6IBW4 605 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 ANO5Q75V66 913 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 NPAS4Q8IUM7 802 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 TMEM192Q8IY95 271 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 SLFN12Q8IYM2 578 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 CRIPAKQ8N1N5 446 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 FIBCD1Q8N539 461 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 ZNF689Q96CS4 500 aaPredicted RBP18.07■□□□□ 0.48
CTSB-213ENST00000527215 ZNF668Q96K58 619 aaPredicted RBP18.07■□□□□ 0.48
CTSB-213ENST00000527215 ADAMTS10Q9H324 1103 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 LMCD1Q9NZU5 365 aa18.07■□□□□ 0.48
CTSB-213ENST00000527215 P4HBP07237 508 aaKnown RBP18.06■□□□□ 0.48
CTSB-213ENST00000527215 IBSPP21815 317 aaPredicted RBP18.06■□□□□ 0.48
CTSB-213ENST00000527215 GPC3P51654 580 aa18.06■□□□□ 0.48
CTSB-213ENST00000527215 HMGN5P82970 282 aaKnown RBP18.06■□□□□ 0.48
CTSB-213ENST00000527215 DRP2Q13474 957 aa18.06■□□□□ 0.48
CTSB-213ENST00000527215 BTG3Q14201 252 aaPredicted RBP18.06■□□□□ 0.48
CTSB-213ENST00000527215 EPHA7Q15375 998 aa18.06■□□□□ 0.48
CTSB-213ENST00000527215 SAFBQ15424 915 aaKnown RBP eCLIP18.06■□□□□ 0.48
CTSB-213ENST00000527215 CALCRLQ16602 461 aa18.06■□□□□ 0.48
CTSB-213ENST00000527215 ADAM2Q99965 735 aa18.06■□□□□ 0.48
CTSB-213ENST00000527215 WRAP73Q9P2S5 460 aaPredicted RBP18.06■□□□□ 0.48
CTSB-213ENST00000527215 COG5Q9UP83 839 aa18.06■□□□□ 0.48
CTSB-213ENST00000527215 IGKV6-21A0A0C4DH24 114 aa18.05■□□□□ 0.48
CTSB-213ENST00000527215 DENND3A2RUS2 1198 aa18.05■□□□□ 0.48
CTSB-213ENST00000527215 NEMFO60524 1076 aa18.05■□□□□ 0.48
CTSB-213ENST00000527215 DKC1O60832 514 aaKnown RBP eCLIP18.05■□□□□ 0.484e-14■■■■■ 34
CTSB-213ENST00000527215 MAFO75444 373 aaPredicted RBP18.05■□□□□ 0.48
CTSB-213ENST00000527215 LINC00271P0C7V0 271 aa18.05■□□□□ 0.48
CTSB-213ENST00000527215 STAG3L1P0CL83 205 aa18.05■□□□□ 0.48
CTSB-213ENST00000527215 SARSP49591 514 aaKnown RBP18.05■□□□□ 0.48
CTSB-213ENST00000527215 FAM43BQ6ZT52 329 aaPredicted RBP18.05■□□□□ 0.48
CTSB-213ENST00000527215 ZNF710Q8N1W2 664 aa18.05■□□□□ 0.48
CTSB-213ENST00000527215 FAM184AQ8NB25 1140 aa18.05■□□□□ 0.48
CTSB-213ENST00000527215 SCLT1Q96NL6 688 aa18.05■□□□□ 0.48
CTSB-213ENST00000527215 LXNQ9BS40 222 aa18.05■□□□□ 0.48
CTSB-213ENST00000527215 UPF2Q9HAU5 1272 aaKnown RBP18.05■□□□□ 0.48
CTSB-213ENST00000527215 RGS18Q9NS28 235 aa18.05■□□□□ 0.48
CTSB-213ENST00000527215 LRFN2Q9ULH4 789 aa18.05■□□□□ 0.48
CTSB-213ENST00000527215 H3BNC9 293 aa18.04■□□□□ 0.48
CTSB-213ENST00000527215 ATP2B1P20020 1258 aa18.04■□□□□ 0.48
CTSB-213ENST00000527215 EIF4BP23588 611 aaKnown RBP18.04■□□□□ 0.48
CTSB-213ENST00000527215 CTNNB1P35222 781 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms