RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 B4GALT4O60513 344 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 CYP2C9P11712 490 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 XRCC6P12956 609 aaKnown RBP eCLIP15.26■□□□□ 0.03
CD44-224ENST00000526669 CASP1P29466 404 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 SNW1Q13573 536 aaKnown RBP15.26■□□□□ 0.03
CD44-224ENST00000526669 EMC2Q15006 297 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 PTGISQ16647 500 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 RINT1Q6NUQ1 792 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 MTHFD1LQ6UB35 978 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 SV2BQ7L1I2 683 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 SESTD1Q86VW0 696 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 METTL13Q8N6R0 699 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 SYT2Q8N9I0 419 aaPredicted RBP15.26■□□□□ 0.03
CD44-224ENST00000526669 GPT2Q8TD30 523 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 PPP1R16BQ96T49 567 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 FAM49AQ9H0Q0 323 aaPredicted RBP15.26■□□□□ 0.03
CD44-224ENST00000526669 SUGCTQ9HAC7 445 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 ATP6V0A4Q9HBG4 840 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 XPNPEP1Q9NQW7 623 aa15.26■□□□□ 0.03
CD44-224ENST00000526669 LTBP2Q14767 1821 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 MYMKA6NI61 221 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 PRR29P0C7W0 189 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 GNAT1P11488 350 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 CAPN2P17655 700 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 CYP11B2P19099 503 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 HOXC8P31273 242 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 CDK7P50613 346 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 ADAM17P78536 824 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 PTPN11Q06124 597 aaPredicted RBP15.25■□□□□ 0.03
CD44-224ENST00000526669 DRP2Q13474 957 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 EFCAB12Q6NXP0 572 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 KRBA2Q6ZNG9 492 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 DYMQ7RTS9 669 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 UBE2Q1Q7Z7E8 422 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 CNNM3Q8NE01 707 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 WNT8BQ93098 351 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 TMEM143Q96AN5 459 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 ZNF668Q96K58 619 aaPredicted RBP15.25■□□□□ 0.03
CD44-224ENST00000526669 MTRQ99707 1265 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 PYM1Q9BRP8 204 aaKnown RBP15.25■□□□□ 0.03
CD44-224ENST00000526669 DHX33Q9H6R0 707 aaKnown RBP15.25■□□□□ 0.03
CD44-224ENST00000526669 GPRC5CQ9NQ84 441 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 DACT1Q9NYF0 836 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 NOD1Q9Y239 953 aa15.25■□□□□ 0.03
CD44-224ENST00000526669 MKI67P46013 3256 aaKnown RBP15.25■□□□□ 0.03
CD44-224ENST00000526669 RSPH10B2B2RC85 870 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 MAFO75444 373 aaPredicted RBP15.24■□□□□ 0.03
CD44-224ENST00000526669 DGAT1O75907 488 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 KRT18P05783 430 aaKnown RBP15.24■□□□□ 0.03
CD44-224ENST00000526669 SLFN14P0C7P3 912 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 RSPH10BP0C881 870 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 RFC5P40937 340 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 TLE2Q04725 743 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 TMEM62Q0P6H9 643 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 ARSHQ5FYA8 562 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 FAM102BQ5T8I3 360 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 C1orf186Q6ZWK4 172 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 FAM126BQ8IXS8 530 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 CTAGE1Q96RT6 745 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 BLZF1Q9H2G9 400 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 CUEDC2Q9H467 287 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 PCDH10Q9P2E7 1040 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 TRIP11Q15643 1979 aa15.24■□□□□ 0.03
CD44-224ENST00000526669 MROH7Q68CQ1 1323 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 MBLAC1A4D2B0 266 aaPredicted RBP15.23■□□□□ 0.03
CD44-224ENST00000526669 TLR3O15455 904 aaKnown RBP15.23■□□□□ 0.03
CD44-224ENST00000526669 MAGEB2O15479 319 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 KINO60870 393 aaKnown RBP15.23■□□□□ 0.03
CD44-224ENST00000526669 HIP1RO75146 1068 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 VTNP04004 478 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 MKRN4PQ13434 485 aaPredicted RBP15.23■□□□□ 0.03
CD44-224ENST00000526669 SNX17Q15036 470 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 KCTD17Q8N5Z5 321 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 LINC01465Q8N7H1 131 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 RETREG2Q8NC44 543 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 DNAJB3Q8WWF6 145 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 SLC7A3Q8WY07 619 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 DHX38Q92620 1227 aaKnown RBP15.23■□□□□ 0.03
CD44-224ENST00000526669 ERCC4Q92889 916 aaPredicted RBP15.23■□□□□ 0.03
CD44-224ENST00000526669 PAGE5Q96GU1 130 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 REEP2Q9BRK0 252 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 POLR3FQ9H1D9 316 aaPredicted RBP15.23■□□□□ 0.03
CD44-224ENST00000526669 TNMDQ9H2S6 317 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 PDLIM7Q9NR12 457 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 KBTBD4Q9NVX7 518 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 USP25Q9UHP3 1055 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 AKT3Q9Y243 479 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 PPME1Q9Y570 386 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 PCDHA2Q9Y5H9 948 aa15.23■□□□□ 0.03
CD44-224ENST00000526669 MICAL3Q7RTP6 2002 aa15.22■□□□□ 0.03
CD44-224ENST00000526669 CEP290O15078 2479 aa15.22■□□□□ 0.03
CD44-224ENST00000526669 IGKV6-21A0A0C4DH24 114 aa15.22■□□□□ 0.03
CD44-224ENST00000526669 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
CD44-224ENST00000526669 CTSHP09668 335 aa15.22■□□□□ 0.03
CD44-224ENST00000526669 ASIC1P78348 528 aa15.22■□□□□ 0.03
CD44-224ENST00000526669 CUL4BQ13620 913 aa15.22■□□□□ 0.03
CD44-224ENST00000526669 NFKBIBQ15653 356 aa15.22■□□□□ 0.03
CD44-224ENST00000526669 ASAP3Q8TDY4 903 aa15.22■□□□□ 0.03
CD44-224ENST00000526669 DDX12PQ92771 950 aa15.22■□□□□ 0.03
CD44-224ENST00000526669 ZHX3Q9H4I2 956 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms