RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 PRR23D2P0DMB1 279 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-213ENST00000526357 TRPC1P48995 793 aa10.07□□□□□ -0.8
CTNND1-213ENST00000526357 MMS22LQ6ZRQ5 1243 aa10.07□□□□□ -0.8
CTNND1-213ENST00000526357 ZBTB38Q8NAP3 1195 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-213ENST00000526357 PLAAQ9Y263 795 aa10.07□□□□□ -0.8
CTNND1-213ENST00000526357 PRPF4O43172 522 aaKnown RBP eCLIP10.06□□□□□ -0.84e-8■□□□□ 10.4
CTNND1-213ENST00000526357 KDM1AO60341 852 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 ACSL3O95573 720 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 MMEP08473 750 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 OSTNP61366 133 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 CHRNDQ07001 517 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 SYDE2Q5VT97 1194 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 EMBQ6PCB8 327 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 TBC1D19Q8N5T2 526 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 SAAL1Q96ER3 474 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 SLITRK6Q9H5Y7 841 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 EML4Q9HC35 981 aaKnown RBP10.06□□□□□ -0.8
CTNND1-213ENST00000526357 ATP11BQ9Y2G3 1177 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 BLMP54132 1417 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-213ENST00000526357 A0A0D9SFI3 127 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 VCPP55072 806 aaKnown RBP10.06□□□□□ -0.8
CTNND1-213ENST00000526357 HDLBPQ00341 1268 aaKnown RBP10.06□□□□□ -0.8
CTNND1-213ENST00000526357 PTH1RQ03431 593 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 CATSPER1Q8NEC5 780 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 PANX2Q96RD6 677 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 ADA2Q9NZK5 511 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 THOC2Q8NI27 1593 aaKnown RBP10.06□□□□□ -0.8
CTNND1-213ENST00000526357 RGS12O14924 1447 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 CCDC78A2IDD5 438 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 HAUS5O94927 633 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 FGAP02671 866 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 IL10P22301 178 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 CEP55Q53EZ4 464 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 CATSPER3Q86XQ3 398 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 EGFL8Q99944 293 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 LGR6Q9HBX8 967 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 POLR3EQ9NVU0 708 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 PCDHGB4Q9UN71 923 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 PCDHA5Q9Y5H7 936 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 ZNF197O14709 1029 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 PPEF1O14829 653 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-213ENST00000526357 CSPG5O95196 566 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 KRT7P08729 469 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 IL13P35225 146 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 DDIT3P35638 169 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 SCRN1Q12765 414 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 KIAA2013Q8IYS2 634 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 VPS11Q9H270 941 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 SYNGAP1Q96PV0 1343 aa10.06□□□□□ -0.8
CTNND1-213ENST00000526357 DEAF1O75398 565 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-213ENST00000526357 WDR47O94967 919 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 TCF3P15923 654 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 PSMC1P62191 440 aaKnown RBP10.05□□□□□ -0.8
CTNND1-213ENST00000526357 MRPS15P82914 257 aaKnown RBP10.05□□□□□ -0.8
CTNND1-213ENST00000526357 TSPY1Q01534 308 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 CACNB1Q02641 598 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-213ENST00000526357 KCTD1Q719H9 257 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 EFHBQ8N7U6 833 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 TBCKQ8TEA7 893 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 PARD6BQ9BYG5 372 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 KANSL2Q9H9L4 492 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 ITSN2Q9NZM3 1697 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 RASA4BC9J798 803 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 RASA4O43374 803 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 ARIH2O95376 493 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 GNAT1P11488 350 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 LRRC63Q05C16 580 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 ZNF667Q5HYK9 610 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 SH3TC2Q8TF17 1288 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 ZBED2Q9BTP6 218 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 ATP6V0A4Q9HBG4 840 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 ZNF229Q9UJW7 825 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 ARHGEF10O15013 1369 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 ZNF804BA4D1E1 1349 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 XDHP47989 1333 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 ASAP2O43150 1006 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 PLA2G4BP0C869 781 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 KITP10721 976 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 BMP3P12645 472 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 CCNE1P24864 410 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 AARS2Q5JTZ9 985 aaKnown RBP10.05□□□□□ -0.8
CTNND1-213ENST00000526357 DDX17Q92841 729 aaKnown RBP10.05□□□□□ -0.8
CTNND1-213ENST00000526357 ATG3Q9NT62 314 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 LEMD3Q9Y2U8 911 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 CAB39Q9Y376 341 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-213ENST00000526357 EDC4Q6P2E9 1401 aaKnown RBP10.05□□□□□ -0.8
CTNND1-213ENST00000526357 PRAG1Q86YV5 1406 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 PEG3Q9GZU2 1588 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 MIF4GDA9UHW6 222 aaKnown RBP10.05□□□□□ -0.8
CTNND1-213ENST00000526357 CALB1P05937 261 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 ITPRIPL1Q6GPH6 555 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 TMC4Q7Z404 712 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 PBXIP1Q96AQ6 731 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 PYCARDQ9ULZ3 195 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 TRAPPC8Q9Y2L5 1435 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 PJA2O43164 708 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 NDUFA10O95299 355 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 CASP8Q14790 479 aa10.05□□□□□ -0.8
CTNND1-213ENST00000526357 TBC1D10BQ4KMP7 808 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-213ENST00000526357 SLC10A5Q5PT55 438 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms