RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 FAM205CA6NFA0 338 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 RFXAPO00287 272 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 EML1O00423 815 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 VTNP04004 478 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 CLCN3P51790 818 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 KIZQ2M2Z5 673 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 RTN4RL1Q86UN2 441 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 EXOC8Q8IYI6 725 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 LINC01599Q8WXQ3 324 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 FOXP1Q9H334 677 aaPredicted RBP20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 SUGCTQ9HAC7 445 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 CDHR5Q9HBB8 845 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 C1orf112Q9NSG2 853 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 AKT3Q9Y243 479 aa20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 NOC2LQ9Y3T9 749 aaKnown RBP20.7■□□□□ 0.9
TSPAN4-216ENST00000526055 IGKV6-21A0A0C4DH24 114 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 LPXNO60711 386 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 DNM2P50570 870 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 SPIRE1Q08AE8 756 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 NFX1Q12986 1120 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 ORC2Q13416 577 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 CALCRLQ16602 461 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 C4orf19Q8IY42 314 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 CRIPAKQ8N1N5 446 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 FIBCD1Q8N539 461 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 FAM184AQ8NB25 1140 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 BANK1Q8NDB2 785 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 FBXO22Q8NEZ5 403 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 FBXO18Q8NFZ0 1043 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 TMEM40Q8WWA1 233 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 ZNF689Q96CS4 500 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 CEP89Q96ST8 783 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 OSMRQ99650 979 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 ADAMTS10Q9H324 1103 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 TMX1Q9H3N1 280 aa20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 RC3H2Q9HBD1 1191 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-216ENST00000526055 DDX11L8A8MPP1 907 aa20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 NEMFO60524 1076 aa20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 DGKIO75912 1065 aa20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 NLRP11P59045 1033 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 MTERF2Q49AM1 385 aa20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 SPRED2Q7Z698 418 aa20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 LRRC71Q8N4P6 559 aa20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 ATXN2LQ8WWM7 1075 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 PCDHA12Q9UN75 941 aa20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 ST3GAL5Q9UNP4 418 aa20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 KIF3AQ9Y496 699 aa20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 ADGRA3Q8IWK6 1321 aa20.68■□□□□ 0.9
TSPAN4-216ENST00000526055 MAFO75444 373 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 RB1P06400 928 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 EIF4BP23588 611 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 SARSP49591 514 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 MCM2P49736 904 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 GPC3P51654 580 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 FOSBP53539 338 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 CCDC85BQ15834 202 aaPredicted RBP20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 TMEM266Q2M3C6 531 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 EPC2Q52LR7 807 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 ANO5Q75V66 913 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 FAM228AQ86W67 206 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 TMEM192Q8IY95 271 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 NEK9Q8TD19 979 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 PPM1EQ8WY54 764 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 C17orf80Q9BSJ5 609 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 ZSWIM4Q9H7M6 989 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 RGS18Q9NS28 235 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 THEGQ9P2T0 379 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 MTUS1Q9ULD2 1270 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 PRRC2BQ5JSZ5 2229 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-216ENST00000526055 DENND3A2RUS2 1198 aa20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 C5orf67F2Z3F1 127 aa20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 RBAK-RBAKDNI3L0D1 243 aa20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 NCAPH2Q6IBW4 605 aa20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 SLC24A5Q71RS6 500 aa20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 OTUD6AQ7L8S5 288 aa20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 CMTR2Q8IYT2 770 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 GDPD5Q8WTR4 605 aa20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 CLP1Q92989 425 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 MTMR9Q96QG7 549 aa20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 LXNQ9BS40 222 aa20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 CYP26B1Q9NR63 512 aa20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 LOXHD1Q8IVV2 1947 aa20.66■□□□□ 0.9
TSPAN4-216ENST00000526055 REV3LO60673 3130 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 H3BNC9 293 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 GAS2O43903 313 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 DARSP14868 501 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 RFC5P40937 340 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 TRAPPC10P48553 1259 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 GUCY1B3Q02153 619 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 PTPROQ16827 1216 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 ZNF410Q86VK4 478 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 MICALL1Q8N3F8 863 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 SLC7A3Q8WY07 619 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 TBC1D32Q96NH3 1257 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 ADAM2Q99965 735 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 ELAC1Q9H777 363 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 TTC12Q9H892 705 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 LRFN2Q9ULH4 789 aa20.65■□□□□ 0.9
TSPAN4-216ENST00000526055 C9IYK1 514 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms