RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 SPTY2D1Q68D10 685 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-210ENST00000525878 WDR48Q8TAF3 677 aa6.45□□□□□ -1.38
CSDE1-210ENST00000525878 FOXRED1Q96CU9 486 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-210ENST00000525878 TRIM8Q9BZR9 551 aa6.45□□□□□ -1.38
CSDE1-210ENST00000525878 CEP72Q9P209 647 aa6.45□□□□□ -1.38
CSDE1-210ENST00000525878 HECAQ9UBI9 543 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-210ENST00000525878 CTDP1Q9Y5B0 961 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-210ENST00000525878 FAM221BA6H8Z2 402 aa6.44□□□□□ -1.38
CSDE1-210ENST00000525878 NPTXRO95502 500 aa6.44□□□□□ -1.38
CSDE1-210ENST00000525878 ATP2B1P20020 1258 aa6.44□□□□□ -1.38
CSDE1-210ENST00000525878 HIPK4Q8NE63 616 aa6.44□□□□□ -1.38
CSDE1-210ENST00000525878 SHCBP1Q8NEM2 672 aa6.44□□□□□ -1.38
CSDE1-210ENST00000525878 MAGEB10Q96LZ2 347 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-210ENST00000525878 VWA7Q9Y334 891 aa6.44□□□□□ -1.38
CSDE1-210ENST00000525878 SLC12A8A0AV02 714 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 ZBTB48P10074 688 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-210ENST00000525878 APEX1P27695 318 aaKnown RBP6.43□□□□□ -1.38
CSDE1-210ENST00000525878 ALDH6A1Q02252 535 aaKnown RBP6.43□□□□□ -1.38
CSDE1-210ENST00000525878 RBL2Q08999 1139 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 TUBA3CQ13748 450 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 ABHD17CQ6PCB6 329 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 TUBA3EQ6PEY2 450 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 OTOP1Q7RTM1 612 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 RTN4RL1Q86UN2 441 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-210ENST00000525878 TMPRSS6Q8IU80 811 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 CALML6Q8TD86 181 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 RABGGTAQ92696 567 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 DEPDC7Q96QD5 511 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 CEP89Q96ST8 783 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 IKZF4Q9H2S9 585 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 GIT1Q9Y2X7 761 aa6.43□□□□□ -1.38
CSDE1-210ENST00000525878 TCRBV16S1A1N1A0A5B0 115 aa6.42□□□□□ -1.38
CSDE1-210ENST00000525878 HHEXQ03014 270 aa6.42□□□□□ -1.38
CSDE1-210ENST00000525878 RIN1Q13671 783 aa6.42□□□□□ -1.38
CSDE1-210ENST00000525878 SAFB2Q14151 953 aaKnown RBP eCLIP6.42□□□□□ -1.38
CSDE1-210ENST00000525878 SGMS1Q86VZ5 419 aa6.42□□□□□ -1.38
CSDE1-210ENST00000525878 D2HGDHQ8N465 521 aa6.42□□□□□ -1.38
CSDE1-210ENST00000525878 LPPQ93052 612 aa6.42□□□□□ -1.38
CSDE1-210ENST00000525878 ARMC5Q96C12 935 aa6.42□□□□□ -1.38
CSDE1-210ENST00000525878 MPHOSPH9Q99550 1183 aa6.42□□□□□ -1.38
CSDE1-210ENST00000525878 HIRIP3Q9BW71 556 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-210ENST00000525878 TANGO6Q9C0B7 1094 aa6.42□□□□□ -1.38
CSDE1-210ENST00000525878 SNTG2Q9NY99 539 aa6.42□□□□□ -1.38
CSDE1-210ENST00000525878 C11orf21Q9P2W6 132 aa6.42□□□□□ -1.38
CSDE1-210ENST00000525878 CCDC163A0A0D9SF12 145 aa6.41□□□□□ -1.38
CSDE1-210ENST00000525878 ADCY7P51828 1080 aa6.41□□□□□ -1.38
CSDE1-210ENST00000525878 INHBCP55103 352 aa6.41□□□□□ -1.38
CSDE1-210ENST00000525878 MAP3K12Q12852 859 aa6.41□□□□□ -1.38
CSDE1-210ENST00000525878 ADAM15Q13444 863 aa6.41□□□□□ -1.38
CSDE1-210ENST00000525878 SMN1Q16637 294 aaKnown RBP6.41□□□□□ -1.38
CSDE1-210ENST00000525878 CC2D1AQ6P1N0 951 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-210ENST00000525878 LDLRAD3Q86YD5 345 aa6.41□□□□□ -1.38
CSDE1-210ENST00000525878 THEMISQ8N1K5 641 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-210ENST00000525878 FOXB1Q99853 325 aa6.41□□□□□ -1.38
CSDE1-210ENST00000525878 MRPL4Q9BYD3 311 aaKnown RBP6.41□□□□□ -1.38
CSDE1-210ENST00000525878 PPP1R1BQ9UD71 204 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-210ENST00000525878 SFMBT1Q9UHJ3 866 aa6.41□□□□□ -1.38
CSDE1-210ENST00000525878 FAM184BQ9ULE4 1060 aa6.41□□□□□ -1.38
CSDE1-210ENST00000525878 INHBEP58166 350 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 ADAM8P78325 824 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 IRF9Q00978 393 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 TMEM132BQ14DG7 1078 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 TMEM177Q53S58 311 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 KLHDC10Q6PID8 442 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 BRAPQ7Z569 592 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 FGD2Q7Z6J4 655 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 NEU4Q8WWR8 484 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-210ENST00000525878 LARP4BQ92615 738 aaKnown RBP6.4□□□□□ -1.38
CSDE1-210ENST00000525878 TMEM176AQ96HP8 235 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 MMRN2Q9H8L6 949 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 TRIM39Q9HCM9 518 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 SH3BP1Q9Y3L3 701 aa6.4□□□□□ -1.38
CSDE1-210ENST00000525878 CAPN14A8MX76 684 aa6.39□□□□□ -1.39
CSDE1-210ENST00000525878 CYP27B1O15528 508 aa6.39□□□□□ -1.39
CSDE1-210ENST00000525878 HIP1RO75146 1068 aa6.39□□□□□ -1.39
CSDE1-210ENST00000525878 PEX11BO96011 259 aa6.39□□□□□ -1.39
CSDE1-210ENST00000525878 MECP2P51608 486 aaKnown RBP6.39□□□□□ -1.39
CSDE1-210ENST00000525878 SESN2P58004 480 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-210ENST00000525878 PCSK4Q6UW60 755 aa6.39□□□□□ -1.39
CSDE1-210ENST00000525878 C2orf69Q8N8R5 385 aa6.39□□□□□ -1.39
CSDE1-210ENST00000525878 IGSF22Q8N9C0 903 aa6.39□□□□□ -1.39
CSDE1-210ENST00000525878 ZNF483Q8TF39 744 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-210ENST00000525878 DNAJC7Q99615 494 aa6.39□□□□□ -1.39
CSDE1-210ENST00000525878 SLC6A15Q9H2J7 730 aa6.39□□□□□ -1.39
CSDE1-210ENST00000525878 MAKP20794 623 aa6.38□□□□□ -1.39
CSDE1-210ENST00000525878 FNTBP49356 437 aa6.38□□□□□ -1.39
CSDE1-210ENST00000525878 ATP2C1P98194 919 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-210ENST00000525878 RRP1BQ14684 758 aaKnown RBP6.38□□□□□ -1.39
CSDE1-210ENST00000525878 ZSWIM2Q8NEG5 633 aa6.38□□□□□ -1.39
CSDE1-210ENST00000525878 NKD2Q969F2 451 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-210ENST00000525878 MKL1Q969V6 931 aa6.38□□□□□ -1.39
CSDE1-210ENST00000525878 SLC7A6OSQ96CW6 309 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-210ENST00000525878 C8orf37Q96NL8 207 aa6.38□□□□□ -1.39
CSDE1-210ENST00000525878 BOCQ9BWV1 1114 aa6.38□□□□□ -1.39
CSDE1-210ENST00000525878 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
CSDE1-210ENST00000525878 PARPBPQ9NWS1 579 aa6.38□□□□□ -1.39
CSDE1-210ENST00000525878 A0A087X1B8 175 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 C2orf78A6NCI8 922 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 E9PSI1 815 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 DVL2O14641 736 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms