RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PPP4R3AQ6IN85 833 aa20.88■□□□□ 0.93
CAPN1-203ENST00000525013 BANK1Q8NDB2 785 aa20.88■□□□□ 0.93
CAPN1-203ENST00000525013 TMEM40Q8WWA1 233 aa20.88■□□□□ 0.93
CAPN1-203ENST00000525013 FAM20AQ96MK3 541 aa20.88■□□□□ 0.93
CAPN1-203ENST00000525013 NAP1L4Q99733 375 aaKnown RBP20.88■□□□□ 0.93
CAPN1-203ENST00000525013 ERVK-5Q9HDB9 667 aa20.88■□□□□ 0.93
CAPN1-203ENST00000525013 LRFN2Q9ULH4 789 aa20.88■□□□□ 0.93
CAPN1-203ENST00000525013 ST3GAL5Q9UNP4 418 aa20.88■□□□□ 0.93
CAPN1-203ENST00000525013 DENND3A2RUS2 1198 aa20.87■□□□□ 0.93
CAPN1-203ENST00000525013 FAM205CA6NFA0 338 aa20.87■□□□□ 0.93
CAPN1-203ENST00000525013 GPR182O15218 404 aa20.87■□□□□ 0.93
CAPN1-203ENST00000525013 STAG3L1P0CL83 205 aa20.87■□□□□ 0.93
CAPN1-203ENST00000525013 CTNNB1P35222 781 aa20.87■□□□□ 0.93
CAPN1-203ENST00000525013 NLRP11P59045 1033 aaKnown RBP20.87■□□□□ 0.93
CAPN1-203ENST00000525013 MTERF2Q49AM1 385 aa20.87■□□□□ 0.93
CAPN1-203ENST00000525013 XKR3Q5GH77 459 aa20.87■□□□□ 0.93
CAPN1-203ENST00000525013 EARS2Q5JPH6 523 aaKnown RBP20.87■□□□□ 0.93
CAPN1-203ENST00000525013 B3GNT9Q6UX72 402 aa20.87■□□□□ 0.93
CAPN1-203ENST00000525013 NPAS4Q8IUM7 802 aa20.87■□□□□ 0.93
CAPN1-203ENST00000525013 COL4A6Q14031 1691 aa20.86■□□□□ 0.93
CAPN1-203ENST00000525013 DDX11L8A8MPP1 907 aa20.86■□□□□ 0.93
CAPN1-203ENST00000525013 GPR32O75388 356 aa20.86■□□□□ 0.93
CAPN1-203ENST00000525013 DGKIO75912 1065 aa20.86■□□□□ 0.93
CAPN1-203ENST00000525013 AAK1Q2M2I8 961 aa20.86■□□□□ 0.93
CAPN1-203ENST00000525013 ZNF668Q96K58 619 aaPredicted RBP20.86■□□□□ 0.93
CAPN1-203ENST00000525013 SCLT1Q96NL6 688 aa20.86■□□□□ 0.93
CAPN1-203ENST00000525013 ADAM2Q99965 735 aa20.86■□□□□ 0.93
CAPN1-203ENST00000525013 KCNMB3Q9NPA1 279 aa20.86■□□□□ 0.93
CAPN1-203ENST00000525013 LIMCH1Q9UPQ0 1083 aa20.86■□□□□ 0.93
CAPN1-203ENST00000525013 TMEM150BA6NC51 233 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 H3BNC9 293 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 EML1O00423 815 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 PSMC5P62195 406 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 PPP2R5CQ13362 524 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 PTPROQ16827 1216 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 FAM228AQ86W67 206 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 POTEDQ86YR6 584 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 HLA-CQ95604 372 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 ZNF689Q96CS4 500 aaPredicted RBP20.85■□□□□ 0.93
CAPN1-203ENST00000525013 MRPL38Q96DV4 380 aaKnown RBP20.85■□□□□ 0.93
CAPN1-203ENST00000525013 SH2D3AQ9BRG2 576 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 NIFKQ9BYG3 293 aaKnown RBP20.85■□□□□ 0.93
CAPN1-203ENST00000525013 RC3H2Q9HBD1 1191 aaKnown RBP20.85■□□□□ 0.93
CAPN1-203ENST00000525013 VAV3Q9UKW4 847 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 COG5Q9UP83 839 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 PCDHB7Q9Y5E2 793 aa20.85■□□□□ 0.93
CAPN1-203ENST00000525013 BTBD18B2RXH4 712 aa20.84■□□□□ 0.93
CAPN1-203ENST00000525013 MGEA5O60502 916 aa20.84■□□□□ 0.93
CAPN1-203ENST00000525013 BAG4O95429 457 aaKnown RBP20.84■□□□□ 0.93
CAPN1-203ENST00000525013 MMP1P03956 469 aa20.84■□□□□ 0.93
CAPN1-203ENST00000525013 BMPR1AP36894 532 aa20.84■□□□□ 0.93
CAPN1-203ENST00000525013 SARSP49591 514 aaKnown RBP20.84■□□□□ 0.93
CAPN1-203ENST00000525013 TARBP2Q15633 366 aaKnown RBP20.84■□□□□ 0.93
CAPN1-203ENST00000525013 C8orf34Q49A92 452 aa20.84■□□□□ 0.93
CAPN1-203ENST00000525013 PAN2Q504Q3 1202 aaKnown RBP20.84■□□□□ 0.93
CAPN1-203ENST00000525013 CCDC83Q8IWF9 413 aa20.84■□□□□ 0.93
CAPN1-203ENST00000525013 ZNF710Q8N1W2 664 aa20.84■□□□□ 0.93
CAPN1-203ENST00000525013 LINC01465Q8N7H1 131 aa20.84■□□□□ 0.93
CAPN1-203ENST00000525013 HAS1Q92839 578 aa20.84■□□□□ 0.93
CAPN1-203ENST00000525013 RWDD3Q9Y3V2 267 aa20.84■□□□□ 0.93
CAPN1-203ENST00000525013 TBX3O15119 743 aa20.83■□□□□ 0.93
CAPN1-203ENST00000525013 STBD1O95210 358 aa20.83■□□□□ 0.93
CAPN1-203ENST00000525013 QARSP47897 775 aaKnown RBP20.83■□□□□ 0.93
CAPN1-203ENST00000525013 ST3GAL1Q11201 340 aa20.83■□□□□ 0.93
CAPN1-203ENST00000525013 FAM43BQ6ZT52 329 aaPredicted RBP20.83■□□□□ 0.93
CAPN1-203ENST00000525013 SLC24A5Q71RS6 500 aa20.83■□□□□ 0.93
CAPN1-203ENST00000525013 DIS3L2Q8IYB7 885 aaKnown RBP20.83■□□□□ 0.93
CAPN1-203ENST00000525013 CRIPAKQ8N1N5 446 aa20.83■□□□□ 0.93
CAPN1-203ENST00000525013 TNFRSF25Q93038 417 aa20.83■□□□□ 0.93
CAPN1-203ENST00000525013 ADAMTS10Q9H324 1103 aa20.83■□□□□ 0.93
CAPN1-203ENST00000525013 C1orf112Q9NSG2 853 aa20.83■□□□□ 0.93
CAPN1-203ENST00000525013 RNF216Q9NWF9 866 aaPredicted RBP20.83■□□□□ 0.93
CAPN1-203ENST00000525013 RB1P06400 928 aa20.82■□□□□ 0.92
CAPN1-203ENST00000525013 EIF4BP23588 611 aaKnown RBP20.82■□□□□ 0.92
CAPN1-203ENST00000525013 GATMP50440 423 aa20.82■□□□□ 0.92
CAPN1-203ENST00000525013 DNM2P50570 870 aa20.82■□□□□ 0.92
CAPN1-203ENST00000525013 PLA2G4FQ68DD2 849 aa20.82■□□□□ 0.92
CAPN1-203ENST00000525013 NCAPH2Q6IBW4 605 aa20.82■□□□□ 0.92
CAPN1-203ENST00000525013 SLFN12Q8IYM2 578 aa20.82■□□□□ 0.92
CAPN1-203ENST00000525013 CMTR2Q8IYT2 770 aaKnown RBP20.82■□□□□ 0.92
CAPN1-203ENST00000525013 ADAMTS19Q8TE59 1207 aa20.82■□□□□ 0.92
CAPN1-203ENST00000525013 NLRP7Q8WX94 980 aa20.82■□□□□ 0.92
CAPN1-203ENST00000525013 CLP1Q92989 425 aaKnown RBP20.82■□□□□ 0.92
CAPN1-203ENST00000525013 C11orf84Q9BUA3 381 aaPredicted RBP20.82■□□□□ 0.92
CAPN1-203ENST00000525013 RGS18Q9NS28 235 aa20.82■□□□□ 0.92
CAPN1-203ENST00000525013 MRPL42Q9Y6G3 142 aaKnown RBP20.82■□□□□ 0.92
CAPN1-203ENST00000525013 KIAA1671Q9BY89 1806 aa20.82■□□□□ 0.92
CAPN1-203ENST00000525013 FNDC1Q4ZHG4 1894 aaPredicted RBP20.81■□□□□ 0.92
CAPN1-203ENST00000525013 BDP1A6H8Y1 2624 aa20.81■□□□□ 0.92
CAPN1-203ENST00000525013 DKC1O60832 514 aaKnown RBP eCLIP20.81■□□□□ 0.92
CAPN1-203ENST00000525013 P4HBP07237 508 aaKnown RBP20.81■□□□□ 0.92
CAPN1-203ENST00000525013 GPC3P51654 580 aa20.81■□□□□ 0.92
CAPN1-203ENST00000525013 KCNQ1P51787 676 aa20.81■□□□□ 0.92
CAPN1-203ENST00000525013 GUCY1B3Q02153 619 aa20.81■□□□□ 0.92
CAPN1-203ENST00000525013 DRP2Q13474 957 aa20.81■□□□□ 0.92
CAPN1-203ENST00000525013 SAFBQ15424 915 aaKnown RBP eCLIP20.81■□□□□ 0.92
CAPN1-203ENST00000525013 TIGD5Q53EQ6 642 aa20.81■□□□□ 0.92
CAPN1-203ENST00000525013 ANO5Q75V66 913 aa20.81■□□□□ 0.92
CAPN1-203ENST00000525013 C9IYK1 514 aa20.8■□□□□ 0.92
CAPN1-203ENST00000525013 C5orf67F2Z3F1 127 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms