RNA–Protein interactions for RNA: ENST00000524657.1

KDM2A-204, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 3,692 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-204ENST00000524657 PLS1Q14651 629 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 ZC2HC1CQ53FD0 456 aaPredicted RBP10.54□□□□□ -0.72
KDM2A-204ENST00000524657 KLHL23Q8NBE8 558 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 DDX17Q92841 729 aaKnown RBP10.54□□□□□ -0.72
KDM2A-204ENST00000524657 GBP5Q96PP8 586 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 RAB3IPQ96QF0 476 aaPredicted RBP10.54□□□□□ -0.72
KDM2A-204ENST00000524657 MYLK2Q9H1R3 596 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 SLITRK6Q9H5Y7 841 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 BSDC1Q9NW68 430 aaPredicted RBP10.54□□□□□ -0.72
KDM2A-204ENST00000524657 RHBDL2Q9NX52 303 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 CHCHD3Q9NX63 227 aaKnown RBP10.54□□□□□ -0.72
KDM2A-204ENST00000524657 AMFRQ9UKV5 643 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 PCDHA4Q9UN74 947 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 JAG2Q9Y219 1238 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 RGPD2P0DJD1 1756 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 MAGEB6P1A0A0J9YX57 407 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 POTEMA6NI47 508 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 SMAPO00193 183 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 H2AFZP0C0S5 128 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 TPBGLP0DKB5 382 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 ATP6V1C1P21283 382 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 KCNA3P22001 575 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 MGAT5Q09328 741 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 AUHQ13825 339 aaKnown RBP10.54□□□□□ -0.72
KDM2A-204ENST00000524657 SETDB1Q15047 1291 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 H2AFVQ71UI9 128 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 JAMLQ86YT9 394 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 SRRM1Q8IYB3 904 aaKnown RBP10.54□□□□□ -0.72
KDM2A-204ENST00000524657 GBP7Q8N8V2 638 aaPredicted RBP10.54□□□□□ -0.72
KDM2A-204ENST00000524657 FAM13CQ8NE31 585 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 SH3RF3Q8TEJ3 882 aaPredicted RBP10.54□□□□□ -0.72
KDM2A-204ENST00000524657 KIFAP3Q92845 792 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 CCSER1Q9C0I3 900 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 CUEDC2Q9H467 287 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 RXFP1Q9HBX9 757 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 ASAP1Q9ULH1 1129 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 ECM29Q5VYK3 1845 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 ARHGAP23Q9P227 1491 aa10.54□□□□□ -0.72
KDM2A-204ENST00000524657 IRS4O14654 1257 aaPredicted RBP10.53□□□□□ -0.72
KDM2A-204ENST00000524657 MARCH6O60337 910 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 FLOT1O75955 427 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 AGTP01019 485 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 OR52Z1P0C646 297 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 CYP2D6P10635 497 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 GALNTL6Q49A17 601 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 KIAA1755Q5JYT7 1200 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 MTHFD1LQ6UB35 978 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 LRRC55Q6ZSA7 311 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 ECHDC2Q86YB7 292 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 MAIP1Q8WWC4 291 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 IQCDQ96DY2 449 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 DCAF5Q96JK2 942 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 FGFBP2Q9BYJ0 223 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 TMX4Q9H1E5 349 aaPredicted RBP10.53□□□□□ -0.72
KDM2A-204ENST00000524657 NAGPAQ9UK23 515 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 PPP1R9AQ9ULJ8 1098 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 AFDNP55196 1824 aaKnown RBP10.53□□□□□ -0.72
KDM2A-204ENST00000524657 MYH2Q9UKX2 1941 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 BRAFP15056 766 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 EAPPQ56P03 285 aaPredicted RBP10.53□□□□□ -0.72
KDM2A-204ENST00000524657 SPOCK2Q92563 424 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 DDX12PQ92771 950 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 PGM2Q96G03 612 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 FAM210AQ96ND0 272 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 PITPNM3Q9BZ71 974 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 UBA5Q9GZZ9 404 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 ANKIB1Q9P2G1 1089 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 PCDHA6Q9UN73 950 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 PCDHA8Q9Y5H6 950 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 DIP2BQ9P265 1576 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 NVLO15381 856 aaKnown RBP10.53□□□□□ -0.72
KDM2A-204ENST00000524657 ECEL1O95672 775 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 SLC5A1P13866 664 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 TRIP13Q15645 432 aaPredicted RBP10.53□□□□□ -0.72
KDM2A-204ENST00000524657 MYOCDQ8IZQ8 938 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 LRRC8CQ8TDW0 803 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 DYDC2Q96IM9 177 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 C7orf25Q9BPX7 421 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 KIAA1683Q9H0B3 1180 aa10.53□□□□□ -0.72
KDM2A-204ENST00000524657 MTRF1LQ9UGC7 380 aaKnown RBP10.53□□□□□ -0.72
KDM2A-204ENST00000524657 ARMCX3Q9UH62 379 aaPredicted RBP10.53□□□□□ -0.72
KDM2A-204ENST00000524657 RBAK-RBAKDNI3L0D1 243 aa10.52□□□□□ -0.72
KDM2A-204ENST00000524657 ATP9AO75110 1047 aa10.52□□□□□ -0.72
KDM2A-204ENST00000524657 GFPT2O94808 682 aa10.52□□□□□ -0.72
KDM2A-204ENST00000524657 UNC5CO95185 931 aa10.52□□□□□ -0.72
KDM2A-204ENST00000524657 GNAT2P19087 354 aa10.52□□□□□ -0.72
KDM2A-204ENST00000524657 RPL21P46778 160 aaKnown RBP10.52□□□□□ -0.72
KDM2A-204ENST00000524657 PUM3Q15397 648 aaKnown RBP10.52□□□□□ -0.72
KDM2A-204ENST00000524657 CCDC105Q8IYK2 499 aa10.52□□□□□ -0.72
KDM2A-204ENST00000524657 LRRC57Q8N9N7 239 aa10.52□□□□□ -0.72
KDM2A-204ENST00000524657 POP1Q99575 1024 aaKnown RBP10.52□□□□□ -0.72
KDM2A-204ENST00000524657 NMRK1Q9NWW6 199 aa10.52□□□□□ -0.72
KDM2A-204ENST00000524657 CYP39A1Q9NYL5 469 aa10.52□□□□□ -0.72
KDM2A-204ENST00000524657 LRRC42Q9Y546 428 aa10.52□□□□□ -0.72
KDM2A-204ENST00000524657 RPTORQ8N122 1335 aa10.52□□□□□ -0.73
KDM2A-204ENST00000524657 SPAG7O75391 227 aa10.52□□□□□ -0.73
KDM2A-204ENST00000524657 CALM1P0DP23 149 aa10.52□□□□□ -0.73
KDM2A-204ENST00000524657 CALM2P0DP24 149 aa10.52□□□□□ -0.73
KDM2A-204ENST00000524657 CALM3P0DP25 149 aa10.52□□□□□ -0.73
KDM2A-204ENST00000524657 CACNA2D1P54289 1103 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms