RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 CXXC1Q9P0U4 656 aaPredicted RBP11.31□□□□□ -0.6
TTC39A-213ENST00000524442 TMEM265A0A087WTH1 108 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 TMEM150BA6NC51 233 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 SOX1O00570 391 aaPredicted RBP11.3□□□□□ -0.6
TTC39A-213ENST00000524442 GPR32O75388 356 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 DGAT1O75907 488 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 GHRP10912 638 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 ATP2A2P16615 1042 aaKnown RBP11.3□□□□□ -0.6
TTC39A-213ENST00000524442 CLCN3P51790 818 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 POLGP54098 1239 aaPredicted RBP11.3□□□□□ -0.6
TTC39A-213ENST00000524442 NPEPPSP55786 919 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 WDR5P61964 334 aaKnown RBP11.3□□□□□ -0.6
TTC39A-213ENST00000524442 BECN1Q14457 450 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 RAB30Q15771 203 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 XKR9Q5GH70 373 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 KRT79Q5XKE5 535 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 FAM109BQ6ICB4 259 aaPredicted RBP11.3□□□□□ -0.6
TTC39A-213ENST00000524442 LRRC71Q8N4P6 559 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 TCP11Q8WWU5 503 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 CCDC43Q96MW1 224 aaKnown RBP11.3□□□□□ -0.6
TTC39A-213ENST00000524442 FTHL17Q9BXU8 183 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 DBR1Q9UK59 544 aaKnown RBP11.3□□□□□ -0.6
TTC39A-213ENST00000524442 AKT3Q9Y243 479 aa11.3□□□□□ -0.6
TTC39A-213ENST00000524442 MORC2Q9Y6X9 1032 aaPredicted RBP11.3□□□□□ -0.6
TTC39A-213ENST00000524442 ASAP2O43150 1006 aa11.29□□□□□ -0.6
TTC39A-213ENST00000524442 SLC26A4O43511 780 aa11.29□□□□□ -0.6
TTC39A-213ENST00000524442 MED24O75448 989 aa11.29□□□□□ -0.6
TTC39A-213ENST00000524442 EIF4BP23588 611 aaKnown RBP11.29□□□□□ -0.6
TTC39A-213ENST00000524442 CCT6AP40227 531 aaKnown RBP11.29□□□□□ -0.6
TTC39A-213ENST00000524442 RARRES1P49788 294 aa11.29□□□□□ -0.6
TTC39A-213ENST00000524442 TMEM62Q0P6H9 643 aa11.29□□□□□ -0.6
TTC39A-213ENST00000524442 MKRN4PQ13434 485 aaPredicted RBP11.29□□□□□ -0.6
TTC39A-213ENST00000524442 SF3A1Q15459 793 aaKnown RBP11.29□□□□□ -0.6
TTC39A-213ENST00000524442 KIZQ2M2Z5 673 aa11.29□□□□□ -0.6
TTC39A-213ENST00000524442 PLA2G4FQ68DD2 849 aa11.29□□□□□ -0.6
TTC39A-213ENST00000524442 ZNF410Q86VK4 478 aa11.29□□□□□ -0.6
TTC39A-213ENST00000524442 AK8Q96MA6 479 aa11.29□□□□□ -0.6
TTC39A-213ENST00000524442 ADAMTS10Q9H324 1103 aa11.29□□□□□ -0.6
TTC39A-213ENST00000524442 MSRAQ9UJ68 235 aa11.29□□□□□ -0.6
TTC39A-213ENST00000524442 SCN5AQ14524 2016 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 VWA3AA6NCI4 1184 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 ZBTB39O15060 712 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 GPR182O15218 404 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 RPS6KA5O75582 802 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 AMHP03971 560 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 VTNP04004 478 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 LONP1P36776 959 aaKnown RBP11.28□□□□□ -0.6
TTC39A-213ENST00000524442 GPC3P51654 580 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 NLRP11P59045 1033 aaKnown RBP11.28□□□□□ -0.6
TTC39A-213ENST00000524442 PAK2Q13177 524 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 EMC2Q15006 297 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 IL17AQ16552 155 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
TTC39A-213ENST00000524442 SNX29Q8TEQ0 813 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 PIGOQ8TEQ8 1089 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 PSPC1Q8WXF1 523 aaKnown RBP11.28□□□□□ -0.6
TTC39A-213ENST00000524442 LRCH3Q96II8 777 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 MTRQ99707 1265 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 SH2D3AQ9BRG2 576 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 OSBPL7Q9BZF2 842 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 INO80BQ9C086 356 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-213ENST00000524442 NT5C3AQ9H0P0 336 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 AGO3Q9H9G7 860 aaKnown RBP11.28□□□□□ -0.6
TTC39A-213ENST00000524442 ATP6V0A4Q9HBG4 840 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-213ENST00000524442 SUCLA2Q9P2R7 463 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-213ENST00000524442 PADI3Q9ULW8 664 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 GINS2Q9Y248 185 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 PCDHA11Q9Y5I1 949 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 WDR81Q562E7 1941 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 LAMA3Q16787 3333 aa11.28□□□□□ -0.6
TTC39A-213ENST00000524442 ZSCAN22P10073 491 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-213ENST00000524442 DARSP14868 501 aaKnown RBP11.27□□□□□ -0.61
TTC39A-213ENST00000524442 DNAJB2P25686 324 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 CD52P31358 61 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 MXD4Q14582 209 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-213ENST00000524442 PTPAQ15257 358 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 TCTN1Q2MV58 587 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 HYIQ5T013 277 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 ATL3Q6DD88 541 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 POTEGQ6S5H5 508 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 RHPN2Q8IUC4 686 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 HERC6Q8IVU3 1022 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 MCPH1Q8NEM0 835 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 TMEM40Q8WWA1 233 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 NLRP7Q8WX94 980 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 ZNF396Q96N95 335 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-213ENST00000524442 SCLT1Q96NL6 688 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 OSMRQ99650 979 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 PBX4Q9BYU1 374 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 GCOM2Q9BZD3 368 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-213ENST00000524442 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 ERVK-5Q9HDB9 667 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 KIAA1024Q9UPX6 916 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 DNM3Q9UQ16 869 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 NOC2LQ9Y3T9 749 aaKnown RBP11.27□□□□□ -0.61
TTC39A-213ENST00000524442 COL4A3BPQ9Y5P4 624 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 TET1Q8NFU7 2136 aa11.27□□□□□ -0.61
TTC39A-213ENST00000524442 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-213ENST00000524442 ARHGEF35A5YM69 484 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms