RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 LINC01599Q8WXQ3 324 aa13.38□□□□□ -0.27
CLN8-207ENST00000524258 ANKEF1Q9NU02 776 aa13.38□□□□□ -0.27
CLN8-207ENST00000524258 PPME1Q9Y570 386 aa13.38□□□□□ -0.27
CLN8-207ENST00000524258 MUTP22033 750 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 CDC25AP30304 524 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 PBX2P40425 430 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 RARRES1P49788 294 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 GPC3P51654 580 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 GRIN1Q05586 938 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 TBC1D8BQ0IIM8 1120 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 PKP1Q13835 747 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 KIZQ2M2Z5 673 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 ARL6IP4Q66PJ3 421 aaKnown RBP13.37□□□□□ -0.27
CLN8-207ENST00000524258 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.37□□□□□ -0.27
CLN8-207ENST00000524258 TSHZ1Q6ZSZ6 1077 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 METTL13Q8N6R0 699 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 PHOSPHO2Q8TCD6 241 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 PIGOQ8TEQ8 1089 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 CEP170P1Q96L14 293 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 PBX4Q9BYU1 374 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 IFIH1Q9BYX4 1025 aaKnown RBP13.37□□□□□ -0.27
CLN8-207ENST00000524258 TMX1Q9H3N1 280 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 ERVK-5Q9HDB9 667 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 YBX2Q9Y2T7 364 aaKnown RBP13.37□□□□□ -0.27
CLN8-207ENST00000524258 NOC2LQ9Y3T9 749 aaKnown RBP13.37□□□□□ -0.27
CLN8-207ENST00000524258 CLIC4Q9Y696 253 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 SLC4A7Q9Y6M7 1214 aa13.37□□□□□ -0.27
CLN8-207ENST00000524258 MORC2Q9Y6X9 1032 aaPredicted RBP13.37□□□□□ -0.27
CLN8-207ENST00000524258 ACTN1P12814 892 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 CD52P31358 61 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 CRYBB1P53674 252 aaPredicted RBP13.36□□□□□ -0.27
CLN8-207ENST00000524258 NLRP11P59045 1033 aaKnown RBP13.36□□□□□ -0.27
CLN8-207ENST00000524258 IKBKEQ14164 716 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 SF3A1Q15459 793 aaKnown RBP13.36□□□□□ -0.27
CLN8-207ENST00000524258 HYIQ5T013 277 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 POTEGQ6S5H5 508 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 DTHD1Q6ZMT9 781 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 KCNK18Q7Z418 384 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 FAM228AQ86W67 206 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 USP38Q8NB14 1042 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 LRRC15Q8TF66 581 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 SEPT8Q92599 483 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 TTYH1Q9H313 450 aaPredicted RBP13.36□□□□□ -0.27
CLN8-207ENST00000524258 SUGCTQ9HAC7 445 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 LRWD1Q9UFC0 647 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 DBR1Q9UK59 544 aaKnown RBP13.36□□□□□ -0.27
CLN8-207ENST00000524258 PADI3Q9ULW8 664 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 ZDHHC9Q9Y397 364 aa13.36□□□□□ -0.27
CLN8-207ENST00000524258 PTPRSQ13332 1948 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 ZBBXA8MT70 800 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 ENPP3O14638 875 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 MGEA5O60502 916 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 ARHGEF15O94989 841 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 ATP2A2P16615 1042 aaKnown RBP13.35□□□□□ -0.27
CLN8-207ENST00000524258 TMOD1P28289 359 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 RFC5P40937 340 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 RABGGTBP53611 331 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 DSC3Q14574 896 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 XKR9Q5GH70 373 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 OTUD6AQ7L8S5 288 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 TMCO2Q7Z6W1 182 aaPredicted RBP13.35□□□□□ -0.27
CLN8-207ENST00000524258 HERC6Q8IVU3 1022 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 SPRYD3Q8NCJ5 442 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 APBB2Q92870 758 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 ZNF668Q96K58 619 aaPredicted RBP13.35□□□□□ -0.27
CLN8-207ENST00000524258 PNMA5Q96PV4 448 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 USP28Q96RU2 1077 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 PPP1R16BQ96T49 567 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 SLC9A7Q96T83 725 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 OSMRQ99650 979 aa13.35□□□□□ -0.27
CLN8-207ENST00000524258 MTIF3Q9H2K0 278 aaKnown RBP13.35□□□□□ -0.27
CLN8-207ENST00000524258 ZSCAN16Q9H4T2 348 aaPredicted RBP13.35□□□□□ -0.27
CLN8-207ENST00000524258 SUCLA2Q9P2R7 463 aaPredicted RBP13.35□□□□□ -0.27
CLN8-207ENST00000524258 CDH23Q9H251 3354 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 EFCAB14O75071 495 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 DARSP14868 501 aaKnown RBP13.34□□□□□ -0.27
CLN8-207ENST00000524258 MYOGP15173 224 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 EIF4BP23588 611 aaKnown RBP13.34□□□□□ -0.27
CLN8-207ENST00000524258 DNAJB2P25686 324 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 ARL2P36404 184 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 CCT6AP40227 531 aaKnown RBP13.34□□□□□ -0.27
CLN8-207ENST00000524258 GRB10Q13322 594 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 EMC2Q15006 297 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 TMEM266Q2M3C6 531 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 KSR1Q8IVT5 923 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 ZNF710Q8N1W2 664 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 PRPF31Q8WWY3 499 aaKnown RBP13.34□□□□□ -0.27
CLN8-207ENST00000524258 TOP1MTQ969P6 601 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 TMEM143Q96AN5 459 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 NACC1Q96RE7 527 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 MAP7D2Q96T17 732 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 IFT122Q9HBG6 1241 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 FBXO2Q9UK22 296 aaPredicted RBP13.34□□□□□ -0.27
CLN8-207ENST00000524258 ST3GAL5Q9UNP4 418 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 AKT3Q9Y243 479 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 MICAL3Q7RTP6 2002 aa13.34□□□□□ -0.27
CLN8-207ENST00000524258 A0A087WZ62 844 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 VWA3AA6NCI4 1184 aa13.33□□□□□ -0.28
CLN8-207ENST00000524258 GAS2O43903 313 aaKnown RBP13.33□□□□□ -0.28
CLN8-207ENST00000524258 GJB5O95377 273 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms