RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 SDSP20132 328 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 PDE4AP27815 886 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 KCNC3Q14003 757 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 PUM1Q14671 1186 aaKnown RBP eCLIP10.66□□□□□ -0.74e-7■□□□□ 9.7
PTPN12-216ENST00000523952 SART3Q15020 963 aaKnown RBP10.66□□□□□ -0.7
PTPN12-216ENST00000523952 ZC3H14Q6PJT7 736 aaKnown RBP10.66□□□□□ -0.7
PTPN12-216ENST00000523952 KCNT2Q6UVM3 1135 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 ZDHHC14Q8IZN3 488 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 LRRC43Q8N309 656 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 DTWD2Q8NBA8 298 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 RMDN1Q96DB5 314 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 RRP36Q96EU6 259 aaKnown RBP10.66□□□□□ -0.7
PTPN12-216ENST00000523952 SDF4Q9BRK5 362 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 TMX1Q9H3N1 280 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 JPH1Q9HDC5 661 aaPredicted RBP10.66□□□□□ -0.7
PTPN12-216ENST00000523952 CYP26B1Q9NR63 512 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 RGS18Q9NS28 235 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 DZANK1Q9NVP4 752 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 TMEM161AQ9NX61 479 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 SPG21Q9NZD8 308 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 HCSTQ9UBK5 93 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 SLC9A2Q9UBY0 812 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 NOC2LQ9Y3T9 749 aaKnown RBP10.66□□□□□ -0.7
PTPN12-216ENST00000523952 HCFC2Q9Y5Z7 792 aa10.66□□□□□ -0.7
PTPN12-216ENST00000523952 SPDYE3A6NKU9 549 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 HIP1O00291 1037 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 IFIT3O14879 490 aaKnown RBP10.65□□□□□ -0.7
PTPN12-216ENST00000523952 STAT5BP51692 787 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 PLCB4Q15147 1175 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 KIAA1841Q6NSI8 718 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 MTHFD1LQ6UB35 978 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 CATIPQ7Z7H3 387 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 SIX5Q8N196 739 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 RNF169Q8NCN4 708 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 DSCC1Q9BVC3 393 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 TMEM117Q9H0C3 514 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 CWH43Q9H720 699 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 ERVK-5Q9HDB9 667 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 ST3GAL5Q9UNP4 418 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 PCDHB15Q9Y5E8 787 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 DOCK8Q8NF50 2099 aa10.65□□□□□ -0.7
PTPN12-216ENST00000523952 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.64□□□□□ -0.71
PTPN12-216ENST00000523952 C9IYK1 514 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 BACH1O14867 736 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 MAFGO15525 162 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 MGEA5O60502 916 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 CXCL14O95715 111 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 EOMESO95936 686 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 ZSCAN20P17040 1043 aaPredicted RBP10.64□□□□□ -0.71
PTPN12-216ENST00000523952 PBX3P40426 434 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 TDGQ13569 410 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 WTAPQ15007 396 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 SEC23AQ15436 765 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 CWF19L1Q69YN2 538 aaKnown RBP10.64□□□□□ -0.71
PTPN12-216ENST00000523952 CCDC149Q6ZUS6 474 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 OTOP3Q7RTS5 596 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 RALYLQ86SE5 291 aaKnown RBP10.64□□□□□ -0.71
PTPN12-216ENST00000523952 C12orf76Q8N812 135 aaPredicted RBP10.64□□□□□ -0.71
PTPN12-216ENST00000523952 MRPL43Q8N983 215 aaKnown RBP10.64□□□□□ -0.71
PTPN12-216ENST00000523952 CYP2W1Q8TAV3 490 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 TMEM169Q96HH4 297 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 PPP1R16BQ96T49 567 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 ELAC1Q9H777 363 aaKnown RBP10.64□□□□□ -0.71
PTPN12-216ENST00000523952 USTQ9Y2C2 406 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 CACNA1IQ9P0X4 2223 aa10.64□□□□□ -0.71
PTPN12-216ENST00000523952 FRYLO94915 3013 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 C2orf71A6NGG8 1288 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 PIK3CDO00329 1044 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 PI15O43692 258 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 CYTH3O43739 400 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 CLASP2O75122 1294 aaKnown RBP10.63□□□□□ -0.71
PTPN12-216ENST00000523952 KLRC1P26715 233 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 ALDH7A1P49419 539 aaKnown RBP10.63□□□□□ -0.71
PTPN12-216ENST00000523952 METAP2P50579 478 aaKnown RBP eCLIP10.63□□□□□ -0.71
PTPN12-216ENST00000523952 MMRN1Q13201 1228 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 NONOQ15233 471 aaKnown RBP eCLIP10.63□□□□□ -0.71
PTPN12-216ENST00000523952 FAM160B1Q5W0V3 765 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 CYB5R4Q7L1T6 521 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 PLPPR4Q7Z2D5 763 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 CABP7Q86V35 215 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 CKAP2LQ8IYA6 745 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 CTCFLQ8NI51 663 aaPredicted RBP10.63□□□□□ -0.71
PTPN12-216ENST00000523952 OSMRQ99650 979 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 PSTPIP2Q9H939 334 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 R4GN57 208 aa10.63□□□□□ -0.71
PTPN12-216ENST00000523952 CEP250Q9BV73 2442 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 MEIS2O14770 477 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 HBP1O60381 514 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 KRT37O76014 449 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 ITGB5P18084 799 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 KIF5BP33176 963 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 SLC26A2P50443 739 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 CRYBB1P53674 252 aaPredicted RBP10.62□□□□□ -0.71
PTPN12-216ENST00000523952 ACTR2P61160 394 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 GIT2Q14161 759 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 KIZQ2M2Z5 673 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 TMC5Q6UXY8 1006 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 METTL13Q8N6R0 699 aa10.62□□□□□ -0.71
PTPN12-216ENST00000523952 RIN2Q8WYP3 895 aaPredicted RBP10.62□□□□□ -0.71
PTPN12-216ENST00000523952 RUBCNQ92622 972 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms