RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 LRRC31Q6UY01 552 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 STXBP4Q6ZWJ1 553 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 FAM160B2Q86V87 743 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 TSEN2Q8NCE0 465 aaKnown RBP12.35□□□□□ -0.43
TNPO1-213ENST00000523768 TPCN2Q8NHX9 752 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 FAM76AQ8TAV0 307 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 VCPKMTQ9H867 229 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 RBBP6Q7Z6E9 1792 aaKnown RBP12.35□□□□□ -0.43
TNPO1-213ENST00000523768 GOLGA6CA6NDK9 693 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 ZBTB39O15060 712 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 CHMP2AO43633 222 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 SHOX2O60902 331 aaPredicted RBP12.35□□□□□ -0.43
TNPO1-213ENST00000523768 H2AFZP0C0S5 128 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 GOLGA6DP0CG33 693 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 ZBTB48P10074 688 aaPredicted RBP12.35□□□□□ -0.43
TNPO1-213ENST00000523768 NPEPPSP55786 919 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 TNNC1P63316 161 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 ZC2HC1CQ53FD0 456 aaPredicted RBP12.35□□□□□ -0.43
TNPO1-213ENST00000523768 CCDC174Q6PII3 467 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 SLC30A10Q6XR72 485 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 H2AFVQ71UI9 128 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 SLFN11Q7Z7L1 901 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 ACTRT1Q8TDG2 376 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 EPB41L5Q9HCM4 733 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 GOLGA6AQ9NYA3 693 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 ZNF70Q9UC06 446 aaPredicted RBP12.35□□□□□ -0.43
TNPO1-213ENST00000523768 DAAM1Q9Y4D1 1078 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 PSME4Q14997 1843 aa12.35□□□□□ -0.43
TNPO1-213ENST00000523768 DDX3XO00571 662 aaKnown RBP eCLIP12.34□□□□□ -0.437e-10■■■■□ 20.4
TNPO1-213ENST00000523768 GUCY2CP25092 1073 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 FMO5P49326 533 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 CARSP49589 748 aaKnown RBP12.34□□□□□ -0.43
TNPO1-213ENST00000523768 DNA2P51530 1060 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 PPFIA1Q13136 1202 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 PPP2R5AQ15172 486 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 RSBN1LQ6PCB5 846 aaPredicted RBP12.34□□□□□ -0.43
TNPO1-213ENST00000523768 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.34□□□□□ -0.43
TNPO1-213ENST00000523768 HS2ST1Q7LGA3 356 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 FAM178BQ8IXR5 827 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 MREGQ8N565 214 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 EIF1ADQ8N9N8 165 aaKnown RBP12.34□□□□□ -0.43
TNPO1-213ENST00000523768 SLC30A5Q8TAD4 765 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 SCFD2Q8WU76 684 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 LMBR1Q8WVP7 490 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 KRT12Q99456 494 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 ZNF577Q9BSK1 485 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 STK33Q9BYT3 514 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 UNC45AQ9H3U1 944 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 WRAP73Q9P2S5 460 aaPredicted RBP12.34□□□□□ -0.43
TNPO1-213ENST00000523768 KCNK3O14649 394 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 TBC1D12O60347 775 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 HSF2BPO75031 334 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 ARP10275 920 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 NOP2P46087 812 aaKnown RBP12.34□□□□□ -0.43
TNPO1-213ENST00000523768 GUCY2DQ02846 1103 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
TNPO1-213ENST00000523768 GJB7Q6PEY0 223 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 SLC9A9Q8IVB4 645 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 OLIG1Q8TAK6 271 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.34□□□□□ -0.43
TNPO1-213ENST00000523768 CALR3Q96L12 384 aaKnown RBP12.34□□□□□ -0.43
TNPO1-213ENST00000523768 GMLQ99445 158 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 STRA6Q9BX79 667 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 TEKT3Q9BXF9 490 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 IKZF4Q9H2S9 585 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 AGPAT3Q9NRZ7 376 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 CNTNAP1P78357 1384 aa12.34□□□□□ -0.43
TNPO1-213ENST00000523768 CLRN2A0PK11 232 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 EVI5O60447 810 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 SOX5P35711 763 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 MYBPC2Q14324 1141 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 FKBP1CQ5VVH2 108 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 FMNL3Q8IVF7 1028 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 NEK9Q8TD19 979 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 RIT2Q99578 217 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 FEM1BQ9UK73 627 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 NFU1Q9UMS0 254 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 STXBP5LQ9Y2K9 1186 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 FRMD4BQ9Y2L6 1034 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 F8VZ95 297 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 PPP1R37O75864 691 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 UBXN2AP68543 259 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 COG2Q14746 738 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 DLGAP5Q15398 846 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 SPDYE2Q495Y8 402 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 ODR4Q5SWX8 454 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 LDHDQ86WU2 507 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 SYCE1Q8N0S2 351 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 IQCKQ8N0W5 287 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 WHAMMQ8TF30 809 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 CASKIN2Q8WXE0 1202 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 MXRA8Q9BRK3 442 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 SYT11Q9BT88 431 aa12.33□□□□□ -0.44
TNPO1-213ENST00000523768 SUCLA2Q9P2R7 463 aaPredicted RBP12.33□□□□□ -0.44
TNPO1-213ENST00000523768 ZSCAN5CA6NGD5 496 aaPredicted RBP12.32□□□□□ -0.44
TNPO1-213ENST00000523768 IPO5O00410 1097 aaKnown RBP12.32□□□□□ -0.44
TNPO1-213ENST00000523768 RAD51CO43502 376 aa12.32□□□□□ -0.44
TNPO1-213ENST00000523768 BCRP11274 1271 aa12.32□□□□□ -0.44
TNPO1-213ENST00000523768 LMNB1P20700 586 aa12.32□□□□□ -0.44
TNPO1-213ENST00000523768 GRIPAP1Q4V328 841 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms