RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 PLCB4Q15147 1175 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 CALCRLQ16602 461 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 ZNF484Q5JVG2 852 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 SWSAP1Q6NVH7 229 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 PDXDC2PQ6P474 469 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 B3GNT9Q6UX72 402 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 LRRC8DQ7L1W4 858 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 MIER3Q7Z3K6 550 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 RSPH3Q86UC2 560 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 HSCBQ8IWL3 235 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 CKAP2LQ8IYA6 745 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 BANK1Q8NDB2 785 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 PPP1R13LQ8WUF5 828 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 DHX38Q92620 1227 aaKnown RBP8.71□□□□□ -1.02
FAM49B-227ENST00000523514 KCTD12Q96CX2 325 aaKnown RBP8.71□□□□□ -1.02
FAM49B-227ENST00000523514 CTAGE1Q96RT6 745 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 UNC45AQ9H3U1 944 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 SETD4Q9NVD3 440 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 GABBR1Q9UBS5 961 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 UMODL1Q5DID0 1318 aa8.71□□□□□ -1.02
FAM49B-227ENST00000523514 TREHO43280 583 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 IQCF3P0C7M6 154 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 CKBP12277 381 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 ACTN1P12814 892 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 INSRRP14616 1297 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 CSF2RAP15509 400 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 THPOP40225 353 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 TRIM71Q2Q1W2 868 aaKnown RBP8.7□□□□□ -1.02
FAM49B-227ENST00000523514 LRIT3Q3SXY7 679 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 TMEM259Q4ZIN3 620 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 LARP1BQ659C4 914 aaKnown RBP8.7□□□□□ -1.02
FAM49B-227ENST00000523514 RPAINQ86UA6 219 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 NEK9Q8TD19 979 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 SCLYQ96I15 445 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 UIMC1Q96RL1 719 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 NRBP2Q9NSY0 501 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 TSR3Q9UJK0 312 aaKnown RBP8.7□□□□□ -1.02
FAM49B-227ENST00000523514 VAV3Q9UKW4 847 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 SCN5AQ14524 2016 aa8.7□□□□□ -1.02
FAM49B-227ENST00000523514 RSPH10B2B2RC85 870 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 KIF28PB7ZC32 967 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 LAD1O00515 517 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 FGBP02675 491 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 RSPH10BP0C881 870 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 PSMC5P62195 406 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 IGBP1P78318 339 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 ZNF200P98182 395 aaPredicted RBP8.69□□□□□ -1.02
FAM49B-227ENST00000523514 PRKCEQ02156 737 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 EPHA7Q15375 998 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 PUS10Q3MIT2 529 aaKnown RBP8.69□□□□□ -1.02
FAM49B-227ENST00000523514 RILPL1Q5EBL4 403 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 TTC38Q5R3I4 469 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 MCTP1Q6DN14 999 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 BRAPQ7Z569 592 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 HAS1Q92839 578 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 RNPC3Q96LT9 517 aaKnown RBP8.69□□□□□ -1.02
FAM49B-227ENST00000523514 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.69□□□□□ -1.02
FAM49B-227ENST00000523514 PCDHA12Q9UN75 941 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 PPME1Q9Y570 386 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 PCDHA2Q9Y5H9 948 aa8.69□□□□□ -1.02
FAM49B-227ENST00000523514 SMIM35A0A1B0GVV1 85 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 M0QZ92 97 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 MAGEB2O15479 319 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 EFCAB14O75071 495 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 BAIAP3O94812 1187 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 CXCL10P02778 98 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 P4HBP07237 508 aaKnown RBP8.68□□□□□ -1.02
FAM49B-227ENST00000523514 HSP90AA1P07900 732 aaKnown RBP8.68□□□□□ -1.02
FAM49B-227ENST00000523514 OR52Z1P0C646 297 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 ATP2B1P20020 1258 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 ATP4AP20648 1035 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 MCM7P33993 719 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 QARSP47897 775 aaKnown RBP8.68□□□□□ -1.02
FAM49B-227ENST00000523514 EPHB4P54760 987 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 SPIRE1Q08AE8 756 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 SHHQ15465 462 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 TMEM266Q2M3C6 531 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 XKR3Q5GH77 459 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 FAM26DQ5JW98 314 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 TMEM240Q5SV17 173 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 C9orf50Q5SZB4 431 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 MARCH8Q5T0T0 291 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 ZNF618Q5T7W0 954 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 IER5Q5VY09 327 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 NCAPH2Q6IBW4 605 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 CNKSR3Q6P9H4 555 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 MTHFD1LQ6UB35 978 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 FAM43BQ6ZT52 329 aaPredicted RBP8.68□□□□□ -1.02
FAM49B-227ENST00000523514 ZNF365Q70YC5 407 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 EXOC8Q8IYI6 725 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 NME8Q8N427 588 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 ERMNQ8TAM6 284 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 HERVK_113Q902F9 699 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 SYMPKQ92797 1274 aaKnown RBP8.68□□□□□ -1.02
FAM49B-227ENST00000523514 WNT8BQ93098 351 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 GJA10Q969M2 543 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 MTMR9Q96QG7 549 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 RAB34Q9BZG1 259 aa8.68□□□□□ -1.02
FAM49B-227ENST00000523514 FTOQ9C0B1 505 aaKnown RBP eCLIP8.68□□□□□ -1.02
FAM49B-227ENST00000523514 TTC12Q9H892 705 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms