RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 ADAMTS5Q9UNA0 930 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 SORCS3Q9UPU3 1222 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 PCDHGC5Q9Y5F6 944 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 R4GN57 208 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 GBF1Q92538 1859 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 COL4A4P53420 1690 aaPredicted RBP4.51□□□□□ -1.69
NPM1-210ENST00000523339 ZNF318Q5VUA4 2279 aa4.51□□□□□ -1.69
NPM1-210ENST00000523339 ACACBO00763 2458 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 CHD6Q8TD26 2715 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 FSD2A1L4K1 749 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 PTPDC1A2A3K4 754 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 RSPH10B2B2RC85 870 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 F5H6K3 240 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 NKRFO15226 690 aaKnown RBP eCLIP4.5□□□□□ -1.693e-6■□□□□ 8.8
NPM1-210ENST00000523339 NBNO60934 754 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 IGSF3O75054 1194 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 EYA4O95677 639 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 CYP2E1P05181 493 aaPredicted RBP4.5□□□□□ -1.69
NPM1-210ENST00000523339 RSPH10BP0C881 870 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 TXNP10599 105 aaKnown RBP4.5□□□□□ -1.69
NPM1-210ENST00000523339 CYP2D6P10635 497 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 CASTP20810 708 aaKnown RBP4.5□□□□□ -1.69
NPM1-210ENST00000523339 NOS3P29474 1203 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 BMPR1AP36894 532 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 CLCN5P51795 746 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 OAZ1P54368 228 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 KLRC3Q07444 240 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 COASYQ13057 564 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 ADAM15Q13444 863 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 CBX2Q14781 532 aaPredicted RBP4.5□□□□□ -1.69
NPM1-210ENST00000523339 SPECC1Q5M775 1068 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 TMEM63BQ5T3F8 832 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 C20orf194Q5TEA3 1177 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 GDF6Q6KF10 455 aaPredicted RBP4.5□□□□□ -1.69
NPM1-210ENST00000523339 CES5AQ6NT32 575 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 RUFY4Q6ZNE9 571 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 WDR63Q8IWG1 891 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 STK11IPQ8N1F8 1099 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 LRRC47Q8N1G4 583 aaKnown RBP4.5□□□□□ -1.69
NPM1-210ENST00000523339 EFHBQ8N7U6 833 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 SMRP1Q8NCR6 262 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 DBF4BQ8NFT6 615 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 SDR42E1Q8WUS8 393 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 WFDC12Q8WWY7 111 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 SCG3Q8WXD2 468 aaKnown RBP4.5□□□□□ -1.69
NPM1-210ENST00000523339 RIN2Q8WYP3 895 aaPredicted RBP4.5□□□□□ -1.69
NPM1-210ENST00000523339 IFT43Q96FT9 208 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 LPIN3Q9BQK8 851 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 KATNAL1Q9BW62 490 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 A1CFQ9NQ94 594 aaKnown RBP4.5□□□□□ -1.69
NPM1-210ENST00000523339 PIH1D3Q9NQM4 214 aaKnown RBP4.5□□□□□ -1.69
NPM1-210ENST00000523339 FEM1BQ9UK73 627 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 DDX49Q9Y6V7 483 aaKnown RBP4.5□□□□□ -1.69
NPM1-210ENST00000523339 TRIOO75962 3097 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 WDR87Q6ZQQ6 2873 aa4.5□□□□□ -1.69
NPM1-210ENST00000523339 GVINP1Q7Z2Y8 2422 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 PRR5-ARHGAP8B1AHC4 643 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 TMEM232C9JQI7 657 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 M0R2N6 131 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 ATP2A1O14983 1001 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 ATP9BO43861 1147 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 KINO60870 393 aaKnown RBP4.49□□□□□ -1.69
NPM1-210ENST00000523339 BCAR3O75815 825 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 NDUFB10O96000 172 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 CXCL10P02778 98 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 MMP1P03956 469 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 CTSHP09668 335 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 RLBP1P12271 317 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 ATF7P17544 494 aaPredicted RBP4.49□□□□□ -1.69
NPM1-210ENST00000523339 NFKB1P19838 968 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 CALML3P27482 149 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 TECP42680 631 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 CDK8P49336 464 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 STAT2P52630 851 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 HTRA4P83105 476 aaPredicted RBP4.49□□□□□ -1.69
NPM1-210ENST00000523339 ARHGAP8P85298 464 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 LMNB2Q03252 620 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 PTK7Q13308 1070 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 LRP8Q14114 963 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 COL19A1Q14993 1142 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 TKFCQ3LXA3 575 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 PERM1Q5SV97 790 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 ZNF618Q5T7W0 954 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 SLC9C2Q5TAH2 1124 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 TAPT1Q6NXT6 567 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 LLGL2Q6P1M3 1020 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 TRIM50Q86XT4 487 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 CCDC105Q8IYK2 499 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 DCLK2Q8N568 766 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 DTWD2Q8NBA8 298 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 REPS2Q8NFH8 660 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 SCFD2Q8WU76 684 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 TOP1MTQ969P6 601 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 MEGF10Q96KG7 1140 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 RTP3Q9BQQ7 232 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 DBNDD2Q9BQY9 259 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 KATNBL1Q9H079 304 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 SLC38A10Q9HBR0 1119 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 DLL3Q9NYJ7 618 aa4.49□□□□□ -1.69
NPM1-210ENST00000523339 CLIP2Q9UDT6 1046 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms