RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 FAM86B2P0C5J1 330 aa25.86■■□□□ 1.73
PVT1-218ENST00000523328 LAG3P18627 525 aa25.86■■□□□ 1.73
PVT1-218ENST00000523328 CRYBB1P53674 252 aaPredicted RBP25.86■■□□□ 1.73
PVT1-218ENST00000523328 APOBRQ0VD83 1088 aa25.86■■□□□ 1.73
PVT1-218ENST00000523328 AP3B2Q13367 1082 aa25.86■■□□□ 1.73
PVT1-218ENST00000523328 DSC3Q14574 896 aa25.86■■□□□ 1.73
PVT1-218ENST00000523328 PDXDC2PQ6P474 469 aa25.86■■□□□ 1.73
PVT1-218ENST00000523328 ATP6V0A4Q9HBG4 840 aa25.86■■□□□ 1.73
PVT1-218ENST00000523328 RBM28Q9NW13 759 aaKnown RBP25.86■■□□□ 1.73
PVT1-218ENST00000523328 SMCO2A6NFE2 343 aa25.85■■□□□ 1.73
PVT1-218ENST00000523328 GPR32O75388 356 aa25.85■■□□□ 1.73
PVT1-218ENST00000523328 VCPP55072 806 aaKnown RBP25.85■■□□□ 1.73
PVT1-218ENST00000523328 PLCB3Q01970 1234 aa25.85■■□□□ 1.73
PVT1-218ENST00000523328 PLPP4Q5VZY2 271 aa25.85■■□□□ 1.73
PVT1-218ENST00000523328 SWSAP1Q6NVH7 229 aa25.85■■□□□ 1.73
PVT1-218ENST00000523328 ANKRD54Q6NXT1 300 aa25.85■■□□□ 1.73
PVT1-218ENST00000523328 SYCE2Q6PIF2 218 aa25.85■■□□□ 1.73
PVT1-218ENST00000523328 SYNE3Q6ZMZ3 975 aa25.85■■□□□ 1.73
PVT1-218ENST00000523328 MRPS27Q92552 414 aaKnown RBP25.85■■□□□ 1.73
PVT1-218ENST00000523328 YTHDC1Q96MU7 727 aaKnown RBP25.85■■□□□ 1.73
PVT1-218ENST00000523328 V9GY48 417 aaPredicted RBP25.85■■□□□ 1.73
PVT1-218ENST00000523328 MYO10Q9HD67 2058 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 IGLV3-22A0A075B6J6 115 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 hCG_1984214I3L0E3 225 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 VTNP04004 478 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 ZNF76P36508 570 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 PTPN21Q16825 1174 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 MIS18BP1Q6P0N0 1132 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 LRRC55Q6ZSA7 311 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 PLA2G4DQ86XP0 818 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 ZNF713Q8N859 430 aaPredicted RBP25.84■■□□□ 1.73
PVT1-218ENST00000523328 CRYGNQ8WXF5 182 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 CASD1Q96PB1 797 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 ESYT1Q9BSJ8 1104 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 TMEM117Q9H0C3 514 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 RNF19AQ9NV58 838 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 BARHL2Q9NY43 387 aa25.84■■□□□ 1.73
PVT1-218ENST00000523328 TECP42680 631 aa25.83■■□□□ 1.73
PVT1-218ENST00000523328 RTN1Q16799 776 aa25.83■■□□□ 1.73
PVT1-218ENST00000523328 BBXQ8WY36 941 aaPredicted RBP25.83■■□□□ 1.73
PVT1-218ENST00000523328 TCF25Q9BQ70 676 aa25.83■■□□□ 1.73
PVT1-218ENST00000523328 BRPF3Q9ULD4 1205 aa25.83■■□□□ 1.73
PVT1-218ENST00000523328 MAFBQ9Y5Q3 323 aaPredicted RBP25.83■■□□□ 1.73
PVT1-218ENST00000523328 HIDE1A8MVS5 230 aa25.82■■□□□ 1.72
PVT1-218ENST00000523328 IPO5O00410 1097 aaKnown RBP25.82■■□□□ 1.72
PVT1-218ENST00000523328 SRGAP2BP0DMP2 458 aa25.82■■□□□ 1.72
PVT1-218ENST00000523328 AVPR2P30518 371 aa25.82■■□□□ 1.72
PVT1-218ENST00000523328 APOL5Q9BWW9 433 aa25.82■■□□□ 1.72
PVT1-218ENST00000523328 GLT8D2Q9H1C3 349 aa25.82■■□□□ 1.72
PVT1-218ENST00000523328 PUF60Q9UHX1 559 aaKnown RBP25.82■■□□□ 1.72
PVT1-218ENST00000523328 CYP3A4P08684 503 aa25.81■■□□□ 1.72
PVT1-218ENST00000523328 KCNT2Q6UVM3 1135 aa25.81■■□□□ 1.72
PVT1-218ENST00000523328 CKAP2LQ8IYA6 745 aa25.81■■□□□ 1.72
PVT1-218ENST00000523328 METTL13Q8N6R0 699 aa25.81■■□□□ 1.72
PVT1-218ENST00000523328 NGRNQ9NPE2 291 aaKnown RBP25.81■■□□□ 1.72
PVT1-218ENST00000523328 ENTPD7Q9NQZ7 604 aa25.81■■□□□ 1.72
PVT1-218ENST00000523328 CFAP54Q96N23 3096 aa25.8■■□□□ 1.72
PVT1-218ENST00000523328 ZBTB43O43298 467 aa25.8■■□□□ 1.72
PVT1-218ENST00000523328 ST18O60284 1047 aa25.8■■□□□ 1.72
PVT1-218ENST00000523328 HOXB8P17481 243 aaPredicted RBP25.8■■□□□ 1.72
PVT1-218ENST00000523328 PBX3P40426 434 aa25.8■■□□□ 1.72
PVT1-218ENST00000523328 EXOSC10Q01780 885 aaKnown RBP25.8■■□□□ 1.72
PVT1-218ENST00000523328 JAKMIP3Q5VZ66 844 aa25.8■■□□□ 1.72
PVT1-218ENST00000523328 LLGL2Q6P1M3 1020 aa25.8■■□□□ 1.72
PVT1-218ENST00000523328 TCEANC2Q96MN5 208 aa25.8■■□□□ 1.72
PVT1-218ENST00000523328 ANO2Q9NQ90 1003 aa25.8■■□□□ 1.72
PVT1-218ENST00000523328 FAM217BQ9NTX9 383 aaPredicted RBP25.8■■□□□ 1.72
PVT1-218ENST00000523328 FAM86C1Q9NVL1 165 aa25.8■■□□□ 1.72
PVT1-218ENST00000523328 HOXA2O43364 376 aa25.79■■□□□ 1.72
PVT1-218ENST00000523328 SP100P23497 879 aaPredicted RBP25.79■■□□□ 1.72
PVT1-218ENST00000523328 CLCN3P51790 818 aa25.79■■□□□ 1.72
PVT1-218ENST00000523328 ZNF746Q6NUN9 644 aaPredicted RBP25.79■■□□□ 1.72
PVT1-218ENST00000523328 TRMT1LQ7Z2T5 733 aaKnown RBP25.79■■□□□ 1.72
PVT1-218ENST00000523328 LRRC43Q8N309 656 aa25.79■■□□□ 1.72
PVT1-218ENST00000523328 LINC01465Q8N7H1 131 aa25.79■■□□□ 1.72
PVT1-218ENST00000523328 ZNF577Q9BSK1 485 aa25.79■■□□□ 1.72
PVT1-218ENST00000523328 CDH22Q9UJ99 828 aa25.79■■□□□ 1.72
PVT1-218ENST00000523328 ADAMTS3O15072 1205 aa25.78■■□□□ 1.72
PVT1-218ENST00000523328 PDGFBP01127 241 aaPredicted RBP25.78■■□□□ 1.72
PVT1-218ENST00000523328 CDC27P30260 824 aa25.78■■□□□ 1.72
PVT1-218ENST00000523328 PPM1AP35813 382 aa25.78■■□□□ 1.72
PVT1-218ENST00000523328 ZNF558Q96NG5 402 aa25.78■■□□□ 1.72
PVT1-218ENST00000523328 ADAMTS10Q9H324 1103 aa25.78■■□□□ 1.72
PVT1-218ENST00000523328 TBC1D22BQ9NU19 505 aa25.78■■□□□ 1.72
PVT1-218ENST00000523328 PLXNA3P51805 1871 aa25.78■■□□□ 1.72
PVT1-218ENST00000523328 ZFHX2Q9C0A1 2572 aaPredicted RBP25.77■■□□□ 1.72
PVT1-218ENST00000523328 NLRP11P59045 1033 aaKnown RBP25.77■■□□□ 1.72
PVT1-218ENST00000523328 TMC7Q7Z402 723 aa25.77■■□□□ 1.72
PVT1-218ENST00000523328 ECHDC2Q86YB7 292 aa25.77■■□□□ 1.72
PVT1-218ENST00000523328 SMAP1Q8IYB5 467 aaPredicted RBP25.77■■□□□ 1.72
PVT1-218ENST00000523328 SNX27Q96L92 541 aa25.77■■□□□ 1.72
PVT1-218ENST00000523328 RIPOR3Q96MK2 946 aa25.77■■□□□ 1.72
PVT1-218ENST00000523328 CEP131Q9UPN4 1083 aa25.77■■□□□ 1.72
PVT1-218ENST00000523328 PCDHA10Q9Y5I2 948 aa25.77■■□□□ 1.72
PVT1-218ENST00000523328 GOLGA8AA7E2F4 631 aa25.76■■□□□ 1.71
PVT1-218ENST00000523328 GOLGA8BA8MQT2 603 aa25.76■■□□□ 1.71
PVT1-218ENST00000523328 MAGEB2O15479 319 aa25.76■■□□□ 1.71
PVT1-218ENST00000523328 PSAPP07602 524 aa25.76■■□□□ 1.71
PVT1-218ENST00000523328 SETQ01105 290 aaPredicted RBP25.76■■□□□ 1.71
PVT1-218ENST00000523328 KRT17Q04695 432 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms