RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 RWDD3Q9Y3V2 267 aa18.27■□□□□ 0.52
CLN8-206ENST00000523237 H3BNC9 293 aa18.26■□□□□ 0.51
CLN8-206ENST00000523237 TBC1D8BQ0IIM8 1120 aa18.26■□□□□ 0.51
CLN8-206ENST00000523237 BTG3Q14201 252 aaPredicted RBP18.26■□□□□ 0.51
CLN8-206ENST00000523237 XKR3Q5GH77 459 aa18.26■□□□□ 0.51
CLN8-206ENST00000523237 LINC01465Q8N7H1 131 aa18.26■□□□□ 0.51
CLN8-206ENST00000523237 KCNMB3Q9NPA1 279 aa18.26■□□□□ 0.51
CLN8-206ENST00000523237 SEPT9Q9UHD8 586 aaPredicted RBP18.26■□□□□ 0.51
CLN8-206ENST00000523237 DENND3A2RUS2 1198 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 TBX3O15119 743 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 MARCH6O60337 910 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 GPR32O75388 356 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 CTNNB1P35222 781 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 PPP2R5CQ13362 524 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 GPM6BQ13491 265 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 TRIM29Q14134 588 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 CRIPAKQ8N1N5 446 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 LRRC71Q8N4P6 559 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 HLA-CQ95604 372 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 MRPL38Q96DV4 380 aaKnown RBP18.25■□□□□ 0.51
CLN8-206ENST00000523237 NIFKQ9BYG3 293 aaKnown RBP18.25■□□□□ 0.51
CLN8-206ENST00000523237 C1orf112Q9NSG2 853 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 RNF216Q9NWF9 866 aaPredicted RBP18.25■□□□□ 0.51
CLN8-206ENST00000523237 LRFN2Q9ULH4 789 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 ST3GAL5Q9UNP4 418 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 KIAA1671Q9BY89 1806 aa18.25■□□□□ 0.51
CLN8-206ENST00000523237 C5orf67F2Z3F1 127 aa18.24■□□□□ 0.51
CLN8-206ENST00000523237 JAK2O60674 1132 aa18.24■□□□□ 0.51
CLN8-206ENST00000523237 RB1P06400 928 aa18.24■□□□□ 0.51
CLN8-206ENST00000523237 SARSP49591 514 aaKnown RBP18.24■□□□□ 0.51
CLN8-206ENST00000523237 NLRP11P59045 1033 aaKnown RBP18.24■□□□□ 0.51
CLN8-206ENST00000523237 PSMC5P62195 406 aa18.24■□□□□ 0.51
CLN8-206ENST00000523237 TFF2Q03403 129 aa18.24■□□□□ 0.51
CLN8-206ENST00000523237 NR5A1Q13285 461 aa18.24■□□□□ 0.51
CLN8-206ENST00000523237 TARBP2Q15633 366 aaKnown RBP18.24■□□□□ 0.51
CLN8-206ENST00000523237 MTERF2Q49AM1 385 aa18.24■□□□□ 0.51
CLN8-206ENST00000523237 EARS2Q5JPH6 523 aaKnown RBP18.24■□□□□ 0.51
CLN8-206ENST00000523237 CMTR2Q8IYT2 770 aaKnown RBP18.24■□□□□ 0.51
CLN8-206ENST00000523237 CLP1Q92989 425 aaKnown RBP18.24■□□□□ 0.51
CLN8-206ENST00000523237 RGS18Q9NS28 235 aa18.24■□□□□ 0.51
CLN8-206ENST00000523237 VAV3Q9UKW4 847 aa18.24■□□□□ 0.51
CLN8-206ENST00000523237 LIMCH1Q9UPQ0 1083 aa18.24■□□□□ 0.51
CLN8-206ENST00000523237 FNDC1Q4ZHG4 1894 aaPredicted RBP18.23■□□□□ 0.51
CLN8-206ENST00000523237 MGEA5O60502 916 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 DKC1O60832 514 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLN8-206ENST00000523237 BAG4O95429 457 aaKnown RBP18.23■□□□□ 0.51
CLN8-206ENST00000523237 MMP1P03956 469 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 LINC00271P0C7V0 271 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 BMPR1AP36894 532 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 SLC24A5Q71RS6 500 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 FAM228AQ86W67 206 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 SLFN12Q8IYM2 578 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 BANK1Q8NDB2 785 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 TNFRSF25Q93038 417 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 ADAM2Q99965 735 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 C11orf84Q9BUA3 381 aaPredicted RBP18.23■□□□□ 0.51
CLN8-206ENST00000523237 ADAMTS10Q9H324 1103 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 PCDHB7Q9Y5E2 793 aa18.23■□□□□ 0.51
CLN8-206ENST00000523237 TCF20Q9UGU0 1960 aaKnown RBP18.22■□□□□ 0.51
CLN8-206ENST00000523237 FAM205CA6NFA0 338 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 DDX11L8A8MPP1 907 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 EML1O00423 815 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 STBD1O95210 358 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 EIF4BP23588 611 aaKnown RBP18.22■□□□□ 0.51
CLN8-206ENST00000523237 QARSP47897 775 aaKnown RBP18.22■□□□□ 0.51
CLN8-206ENST00000523237 DNM2P50570 870 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 C8orf34Q49A92 452 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 TIGD5Q53EQ6 642 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 DIS3L2Q8IYB7 885 aaKnown RBP18.22■□□□□ 0.51
CLN8-206ENST00000523237 ADAMTS19Q8TE59 1207 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 HAS1Q92839 578 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 SCLT1Q96NL6 688 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 VCANP13611 3396 aa18.22■□□□□ 0.51
CLN8-206ENST00000523237 ATG2AQ2TAZ0 1938 aa18.21■□□□□ 0.51
CLN8-206ENST00000523237 TMEM150BA6NC51 233 aa18.21■□□□□ 0.51
CLN8-206ENST00000523237 BTBD18B2RXH4 712 aa18.21■□□□□ 0.51
CLN8-206ENST00000523237 C9IYK1 514 aa18.21■□□□□ 0.51
CLN8-206ENST00000523237 P4HBP07237 508 aaKnown RBP18.21■□□□□ 0.51
CLN8-206ENST00000523237 IBSPP21815 317 aaPredicted RBP18.21■□□□□ 0.51
CLN8-206ENST00000523237 GPC3P51654 580 aa18.21■□□□□ 0.51
CLN8-206ENST00000523237 FOSBP53539 338 aa18.21■□□□□ 0.51
CLN8-206ENST00000523237 CDC42EP1Q00587 391 aa18.21■□□□□ 0.51
CLN8-206ENST00000523237 ST3GAL1Q11201 340 aa18.21■□□□□ 0.51
CLN8-206ENST00000523237 PAN2Q504Q3 1202 aaKnown RBP18.21■□□□□ 0.51
CLN8-206ENST00000523237 CEP89Q96ST8 783 aa18.21■□□□□ 0.51
CLN8-206ENST00000523237 JPH2Q9BR39 696 aaPredicted RBP18.21■□□□□ 0.51
CLN8-206ENST00000523237 PLVAPQ9BX97 442 aa18.21■□□□□ 0.51
CLN8-206ENST00000523237 MRPL42Q9Y6G3 142 aaKnown RBP18.21■□□□□ 0.51
CLN8-206ENST00000523237 IGKV6-21A0A0C4DH24 114 aa18.2■□□□□ 0.5
CLN8-206ENST00000523237 BMP1P13497 986 aa18.2■□□□□ 0.5
CLN8-206ENST00000523237 DARSP14868 501 aaKnown RBP18.2■□□□□ 0.5
CLN8-206ENST00000523237 KCNQ1P51787 676 aa18.2■□□□□ 0.5
CLN8-206ENST00000523237 EPHA7Q15375 998 aa18.2■□□□□ 0.5
CLN8-206ENST00000523237 NCAPH2Q6IBW4 605 aa18.2■□□□□ 0.5
CLN8-206ENST00000523237 ANO5Q75V66 913 aa18.2■□□□□ 0.5
CLN8-206ENST00000523237 CCDC83Q8IWF9 413 aa18.2■□□□□ 0.5
CLN8-206ENST00000523237 NLRP7Q8WX94 980 aa18.2■□□□□ 0.5
CLN8-206ENST00000523237 ZNF668Q96K58 619 aaPredicted RBP18.2■□□□□ 0.5
CLN8-206ENST00000523237 ZSCAN31Q96LW9 406 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms