RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 DEFB128Q7Z7B8 93 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 CCDC155Q8N6L0 562 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 IQUBQ8NA54 791 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 ATP8B4Q8TF62 1192 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 RAD54LQ92698 747 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 NACC1Q96RE7 527 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 SERTAD1Q9UHV2 236 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 DNM3Q9UQ16 869 aa13.3□□□□□ -0.28
PVT1-215ENST00000522963 WDR81Q562E7 1941 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 TREHO43280 583 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 EYA4O95677 639 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 GNAT1P11488 350 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 XRCC6P12956 609 aaKnown RBP eCLIP13.29□□□□□ -0.282e-7■■■■□ 23.7
PVT1-215ENST00000522963 EPHB4P54760 987 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 NPEPPSP55786 919 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 MCM6Q14566 821 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 SHHQ15465 462 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 LONRF3Q496Y0 759 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 C9orf50Q5SZB4 431 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 PLA2G4FQ68DD2 849 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 TDHQ8IZJ6 230 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 KCTD17Q8N5Z5 321 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 DHX38Q92620 1227 aaKnown RBP13.29□□□□□ -0.28
PVT1-215ENST00000522963 SH2D3AQ9BRG2 576 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 PYM1Q9BRP8 204 aaKnown RBP13.29□□□□□ -0.28
PVT1-215ENST00000522963 WNT8AQ9H1J5 351 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 PRO3102Q9H379 93 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 NRBP2Q9NSY0 501 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 ANKEF1Q9NU02 776 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 DACT1Q9NYF0 836 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 STK17AQ9UEE5 414 aa13.29□□□□□ -0.28
PVT1-215ENST00000522963 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
PVT1-215ENST00000522963 DNAH12Q6ZR08 3092 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 RBAK-RBAKDNI3L0D1 243 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 HBP1O60381 514 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 SLFN14P0C7P3 912 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 PLA2G4BP0C869 781 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 INSRRP14616 1297 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 PTMSP20962 102 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 THPOP40225 353 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 RARRES1P49788 294 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 SLC12A3P55017 1021 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 PTK7Q13308 1070 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 GRIK4Q16099 956 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 XKR9Q5GH70 373 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 KRBA2Q6ZNG9 492 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 OTUD6AQ7L8S5 288 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 LMBR1Q8WVP7 490 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 TRAPPC12Q8WVT3 735 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 BBXQ8WY36 941 aaPredicted RBP13.28□□□□□ -0.28
PVT1-215ENST00000522963 LARP4BQ92615 738 aaKnown RBP13.28□□□□□ -0.28
PVT1-215ENST00000522963 WNT8BQ93098 351 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 ZBTB10Q96DT7 871 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 FAM167AQ96KS9 214 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 CTAGE1Q96RT6 745 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 NIFKQ9BYG3 293 aaKnown RBP13.28□□□□□ -0.28
PVT1-215ENST00000522963 BHMT2Q9H2M3 363 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 CUEDC2Q9H467 287 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 USP25Q9UHP3 1055 aa13.28□□□□□ -0.28
PVT1-215ENST00000522963 DBR1Q9UK59 544 aaKnown RBP13.28□□□□□ -0.28
PVT1-215ENST00000522963 EVPLQ92817 2033 aa13.27□□□□□ -0.28
PVT1-215ENST00000522963 ARHGEF35A5YM69 484 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 ZBTB42B2RXF5 422 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 MBD3O95983 291 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 SSBP05455 408 aaKnown RBP eCLIP13.27□□□□□ -0.29
PVT1-215ENST00000522963 CTSHP09668 335 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 IQCF3P0C7M6 154 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 DHX8Q14562 1220 aaKnown RBP13.27□□□□□ -0.29
PVT1-215ENST00000522963 TARBP2Q15633 366 aaKnown RBP13.27□□□□□ -0.29
PVT1-215ENST00000522963 MTERF2Q49AM1 385 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 ZNF365Q70YC5 407 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 GRAMD1CQ8IYS0 662 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 CEP57L1Q8IYX8 460 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 SYT2Q8N9I0 419 aaPredicted RBP13.27□□□□□ -0.29
PVT1-215ENST00000522963 CNNM3Q8NE01 707 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 CAGE1Q8TC20 777 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 STAMQ92783 540 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 PAGE5Q96GU1 130 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 CEP170P1Q96L14 293 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 RNPC3Q96LT9 517 aaKnown RBP13.27□□□□□ -0.29
PVT1-215ENST00000522963 CEP89Q96ST8 783 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 MTRQ99707 1265 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.27□□□□□ -0.292e-10■□□□□ 8.1
PVT1-215ENST00000522963 IL23AQ9NPF7 189 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 CYP26B1Q9NR63 512 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 NRCAMQ92823 1304 aa13.27□□□□□ -0.29
PVT1-215ENST00000522963 PITPNM1O00562 1244 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 KINO60870 393 aaKnown RBP13.26□□□□□ -0.29
PVT1-215ENST00000522963 CKBP12277 381 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 SELPP16109 830 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 CYP11B2P19099 503 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 ZNF484Q5JVG2 852 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 ZNF618Q5T7W0 954 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 RUFY4Q6ZNE9 571 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 SV2BQ7L1I2 683 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 LRRC8DQ7L1W4 858 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 OTOP2Q7RTS6 562 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 SERINC5Q86VE9 423 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 GPBP1Q86WP2 473 aa13.26□□□□□ -0.29
PVT1-215ENST00000522963 RPUSD2Q8IZ73 545 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms