RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 TMEM143Q96AN5 459 aa13.74□□□□□ -0.21
PABPC1-219ENST00000522387 REEP2Q9BRK0 252 aa13.74□□□□□ -0.21
PABPC1-219ENST00000522387 POLGP54098 1239 aaPredicted RBP13.74□□□□□ -0.21
PABPC1-219ENST00000522387 HIC1Q14526 733 aa13.74□□□□□ -0.21
PABPC1-219ENST00000522387 FAM102BQ5T8I3 360 aa13.74□□□□□ -0.21
PABPC1-219ENST00000522387 ATP8B4Q8TF62 1192 aa13.74□□□□□ -0.21
PABPC1-219ENST00000522387 TRIM9Q9C026 710 aa13.74□□□□□ -0.21
PABPC1-219ENST00000522387 NRBP2Q9NSY0 501 aa13.74□□□□□ -0.21
PABPC1-219ENST00000522387 MAPK8IP1Q9UQF2 711 aa13.74□□□□□ -0.21
PABPC1-219ENST00000522387 STK24Q9Y6E0 443 aa13.74□□□□□ -0.21
PABPC1-219ENST00000522387 KAT6AQ92794 2004 aa13.74□□□□□ -0.21
PABPC1-219ENST00000522387 ZBTB42B2RXF5 422 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 MSCO60682 206 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 F2P00734 622 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 ATN1P54259 1190 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-219ENST00000522387 NBPF20Q3BBV1 942 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 C7orf31Q8N865 590 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 U2AF1L4Q8WU68 220 aaKnown RBP13.73□□□□□ -0.21
PABPC1-219ENST00000522387 BBXQ8WY36 941 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-219ENST00000522387 HDAC6Q9UBN7 1215 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 TRIP12Q14669 1992 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-219ENST00000522387 EVPLQ92817 2033 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 LETM1O95202 739 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-219ENST00000522387 SMIM10L2AP0DMW4 78 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 SMIM10L2BP0DMW5 78 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 PSEN2P49810 448 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 ACLYP53396 1101 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 TBC1D8BQ0IIM8 1120 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 TMEM62Q0P6H9 643 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 PPFIA1Q13136 1202 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 PKN2Q16513 984 aaKnown RBP13.73□□□□□ -0.21
PABPC1-219ENST00000522387 KSR1Q8IVT5 923 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 KLHDC9Q8NEP7 349 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 TIGD1Q96MW7 591 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 GINS2Q9Y248 185 aa13.73□□□□□ -0.21
PABPC1-219ENST00000522387 CDH23Q9H251 3354 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 DKC1O60832 514 aaKnown RBP eCLIP13.72□□□□□ -0.21
PABPC1-219ENST00000522387 HOXD8P13378 290 aaPredicted RBP13.72□□□□□ -0.21
PABPC1-219ENST00000522387 CLCN3P51790 818 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 DPYDQ12882 1025 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 GRIK4Q16099 956 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 C1orf186Q6ZWK4 172 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 SH3RF1Q7Z6J0 888 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 GLIS3Q8NEA6 775 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 DIS3LQ8TF46 1054 aaKnown RBP13.72□□□□□ -0.21
PABPC1-219ENST00000522387 LMBR1Q8WVP7 490 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 SLC7A3Q8WY07 619 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 PYM1Q9BRP8 204 aaKnown RBP13.72□□□□□ -0.21
PABPC1-219ENST00000522387 SENP6Q9GZR1 1112 aaPredicted RBP13.72□□□□□ -0.21
PABPC1-219ENST00000522387 ZMYND15Q9H091 742 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 UPF3AQ9H1J1 476 aaKnown RBP13.72□□□□□ -0.21
PABPC1-219ENST00000522387 KIAA1468Q9P260 1216 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 DYNC1I1O14576 645 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 ZEB2O60315 1214 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 HIP1RO75146 1068 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 LYPLA2O95372 231 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 KLRC1P26715 233 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 AMPD3Q01432 767 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 GIT2Q14161 759 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 CCSAPQ6IQ19 270 aaPredicted RBP13.72□□□□□ -0.21
PABPC1-219ENST00000522387 PCSK9Q8NBP7 692 aaKnown RBP13.72□□□□□ -0.21
PABPC1-219ENST00000522387 SMARCE1Q969G3 411 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 MAP7D2Q96T17 732 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 MTG1Q9BT17 334 aaPredicted RBP13.72□□□□□ -0.21
PABPC1-219ENST00000522387 KIFC3Q9BVG8 833 aa13.72□□□□□ -0.21
PABPC1-219ENST00000522387 FAM49AQ9H0Q0 323 aaPredicted RBP13.72□□□□□ -0.21
PABPC1-219ENST00000522387 TREHO43280 583 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 AP5Z1O43299 807 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 HBP1O60381 514 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 COL13A1Q5TAT6 717 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-219ENST00000522387 EFCAB12Q6NXP0 572 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 KANK3Q6NY19 840 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 DNAJC19Q96DA6 116 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 GLT1D1Q96MS3 346 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 FGFBP2Q9BYJ0 223 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 CUEDC2Q9H467 287 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 SLC39A2Q9NP94 309 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 PRDM10Q9NQV6 1147 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 XPNPEP1Q9NQW7 623 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 ANKEF1Q9NU02 776 aa13.71□□□□□ -0.21
PABPC1-219ENST00000522387 HOOK1Q9UJC3 728 aaKnown RBP13.71□□□□□ -0.21
PABPC1-219ENST00000522387 DBR1Q9UK59 544 aaKnown RBP13.71□□□□□ -0.21
PABPC1-219ENST00000522387 A0A1W2PQ45 241 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-219ENST00000522387 A0A1W2PQY0 241 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 KBTBD13C9JR72 458 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 GRIN2DO15399 1336 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-219ENST00000522387 CSDE1O75534 798 aaKnown RBP13.7□□□□□ -0.22
PABPC1-219ENST00000522387 RPN1P04843 607 aaKnown RBP13.7□□□□□ -0.22
PABPC1-219ENST00000522387 SLC26A2P50443 739 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 TYRO3Q06418 890 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 EMC2Q15006 297 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 KMT5BQ4FZB7 885 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 HERC4Q5GLZ8 1057 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-219ENST00000522387 MARCH8Q5T0T0 291 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 LUZP1Q86V48 1076 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 MYCT1Q8N699 235 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 ARRDC4Q8NCT1 418 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 CCDC34Q96HJ3 373 aa13.7□□□□□ -0.22
PABPC1-219ENST00000522387 NIFKQ9BYG3 293 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms