RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 UBXN2AP68543 259 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 LACTBP83111 547 aaPredicted RBP6.84□□□□□ -1.31
FAM49B-218ENST00000520887 RABEP1Q15276 862 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 SHROOM1Q2M3G4 852 aaPredicted RBP6.84□□□□□ -1.31
FAM49B-218ENST00000520887 SNRNP48Q6IEG0 339 aaKnown RBP6.84□□□□□ -1.31
FAM49B-218ENST00000520887 DNAJC14Q6Y2X3 702 aaPredicted RBP6.84□□□□□ -1.31
FAM49B-218ENST00000520887 BEND4Q6ZU67 534 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 Q6ZUG5 572 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 CYB5R4Q7L1T6 521 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 CHST3Q7LGC8 479 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 MCF2L2Q86YR7 1114 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 ZDHHC13Q8IUH4 622 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 SHCBP1Q8NEM2 672 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 CHST13Q8NET6 341 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 ZNF296Q8WUU4 475 aaPredicted RBP6.84□□□□□ -1.31
FAM49B-218ENST00000520887 ANKS1AQ92625 1134 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 BRF1Q92994 677 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 ATG4CQ96DT6 458 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 PTPN18Q99952 460 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 SPATC1LQ9H0A9 340 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 SLKQ9H2G2 1235 aaPredicted RBP6.84□□□□□ -1.31
FAM49B-218ENST00000520887 KCNF1Q9H3M0 494 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 ACAD9Q9H845 621 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 INCENPQ9NQS7 918 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 IL17RBQ9NRM6 502 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 MORF4L1Q9UBU8 362 aa6.84□□□□□ -1.31
FAM49B-218ENST00000520887 ABCB11O95342 1321 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 hCG_1984214I3L0E3 225 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 SMIM22K7EJ46 135 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 VWA5AO00534 786 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 MED26O95402 600 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 ESRRAP11474 423 aaPredicted RBP6.83□□□□□ -1.32
FAM49B-218ENST00000520887 ALAS1P13196 640 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 NEK4P51957 841 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 JAG1P78504 1218 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 GRM4Q14833 912 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 SEC23AQ15436 765 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 CCDC174Q6PII3 467 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 APOA5Q6Q788 366 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 C17orf99Q6UX52 265 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 STOX1Q6ZVD7 989 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 PLEKHH3Q7Z736 793 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 DPP9Q86TI2 863 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 SGMS1Q86VZ5 419 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 HOMER1Q86YM7 354 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 RIOX2Q8IUF8 465 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 ANKRD35Q8N283 1001 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 ZNF713Q8N859 430 aaPredicted RBP6.83□□□□□ -1.32
FAM49B-218ENST00000520887 CCDC148Q8NFR7 591 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 CD99L2Q8TCZ2 262 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 WASF1Q92558 559 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 ASB16Q96NS5 453 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 FAM129BQ96TA1 746 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 MMP19Q99542 508 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 NUP88Q99567 741 aaPredicted RBP6.83□□□□□ -1.32
FAM49B-218ENST00000520887 P2RX7Q99572 595 aaKnown RBP6.83□□□□□ -1.32
FAM49B-218ENST00000520887 APBA2Q99767 749 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 AMNQ9BXJ7 453 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 MAF1Q9H063 256 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 GLT8D2Q9H1C3 349 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 SOX17Q9H6I2 414 aaPredicted RBP6.83□□□□□ -1.32
FAM49B-218ENST00000520887 LY9Q9HBG7 655 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 BRMS1Q9HCU9 246 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 ADD3Q9UEY8 706 aaKnown RBP6.83□□□□□ -1.32
FAM49B-218ENST00000520887 HIF3AQ9Y2N7 669 aa6.83□□□□□ -1.32
FAM49B-218ENST00000520887 MRPL11Q9Y3B7 192 aaKnown RBP6.83□□□□□ -1.32
FAM49B-218ENST00000520887 SLC15A5A6NIM6 579 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 GAS2O43903 313 aaKnown RBP6.82□□□□□ -1.32
FAM49B-218ENST00000520887 IGHA2P01877 340 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 ICAM1P05362 532 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 HSP90AA1P07900 732 aaKnown RBP6.82□□□□□ -1.32
FAM49B-218ENST00000520887 GOLGA8HP0CJ92 632 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 SNHG28P0DPA3 235 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 SMARCA1P28370 1054 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 NOVP48745 357 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 MOGSQ13724 837 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 TRIM29Q14134 588 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 CDC37Q16543 378 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-218ENST00000520887 USH1GQ495M9 461 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 SLC9C1Q4G0N8 1177 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 MFSD14CQ5VZR4 134 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 FBXO46Q6PJ61 603 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-218ENST00000520887 ABRAQ8N0Z2 381 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 SAMD3Q8N6K7 520 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 C12orf50Q8NA57 414 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-218ENST00000520887 KCNB2Q92953 911 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 ZSCAN31Q96LW9 406 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-218ENST00000520887 SPZ1Q9BXG8 430 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 TMPRSS13Q9BYE2 586 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 LRRC2Q9BYS8 371 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 UPF3BQ9BZI7 483 aaKnown RBP6.82□□□□□ -1.32
FAM49B-218ENST00000520887 RAVER2Q9HCJ3 691 aaKnown RBP6.82□□□□□ -1.32
FAM49B-218ENST00000520887 VAT1LQ9HCJ6 419 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 CYP4F12Q9HCS2 524 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 HOMER2Q9NSB8 354 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 RNF146Q9NTX7 359 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 MYH6P13533 1939 aa6.82□□□□□ -1.32
FAM49B-218ENST00000520887 A0A0G2JMZ2 1700 aa6.81□□□□□ -1.32
FAM49B-218ENST00000520887 LOC100289279A0A1B0GTE1 492 aa6.81□□□□□ -1.32
FAM49B-218ENST00000520887 PTPDC1A2A3K4 754 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms