RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.79□□□□□ -0.23e-9■■■■■ 29
CPEB4-208ENST00000520867 ECHDC1Q9NTX5 307 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 CBFA2T3O75081 653 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 PEX14O75381 377 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 ERCC5P28715 1186 aaPredicted RBP13.79□□□□□ -0.2
CPEB4-208ENST00000520867 MARCKSP29966 332 aaPredicted RBP13.79□□□□□ -0.2
CPEB4-208ENST00000520867 ECHS1P30084 290 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 PLCD1P51178 756 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 NR1D2Q14995 579 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 TMTC4Q5T4D3 741 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 PRMT1Q99873 361 aaKnown RBP13.79□□□□□ -0.2
CPEB4-208ENST00000520867 LRRC27Q9C0I9 530 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 LRMDAQ9H2I8 198 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
CPEB4-208ENST00000520867 CCDC134Q9H6E4 229 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 STX8Q9UNK0 236 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 MYH2Q9UKX2 1941 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 PASKQ96RG2 1323 aa13.79□□□□□ -0.2
CPEB4-208ENST00000520867 GOLGA8TH3BQL2 631 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 VILLO15195 856 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 GJB6O95452 261 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 UBTFL1P0CB47 393 aaPredicted RBP13.78□□□□□ -0.2
CPEB4-208ENST00000520867 GOLGA8HP0CJ92 632 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 GLULP15104 373 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 PRLRP16471 622 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 PRCPP42785 496 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 KRT83P78385 493 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 SLC39A14Q15043 492 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 KHDC1Q4VXA5 237 aaKnown RBP13.78□□□□□ -0.2
CPEB4-208ENST00000520867 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 LRRC45Q96CN5 670 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 ITPKCQ96DU7 683 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 PLVAPQ9BX97 442 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 FHDC1Q9C0D6 1143 aaPredicted RBP13.78□□□□□ -0.2
CPEB4-208ENST00000520867 PARVBQ9HBI1 364 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 USP29Q9HBJ7 922 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 NUMBLQ9Y6R0 609 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 ZCCHC11Q5TAX3 1644 aaKnown RBP13.78□□□□□ -0.2
CPEB4-208ENST00000520867 NOTOA8MTQ0 251 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 ARHGAP33O14559 1287 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 HGSO14964 777 aaPredicted RBP13.78□□□□□ -0.2
CPEB4-208ENST00000520867 FOXD2O60548 495 aaPredicted RBP13.78□□□□□ -0.2
CPEB4-208ENST00000520867 GPC3P51654 580 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 TRIM29Q14134 588 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 TGFBIQ15582 683 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 B3GNT6Q6ZMB0 384 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 LRRC74BQ6ZQY2 392 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 CCDC85AQ96PX6 553 aaPredicted RBP13.78□□□□□ -0.2
CPEB4-208ENST00000520867 ZNF184Q99676 751 aaPredicted RBP13.78□□□□□ -0.2
CPEB4-208ENST00000520867 NEURL2Q9BR09 285 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 NUP85Q9BW27 656 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 NSRP1Q9H0G5 558 aaKnown RBP13.78□□□□□ -0.2
CPEB4-208ENST00000520867 ZNF304Q9HCX3 659 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 ADGRB3O60242 1522 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 MED23Q9ULK4 1368 aa13.78□□□□□ -0.2
CPEB4-208ENST00000520867 SMIM31A0A1B0GVY4 71 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 ANKRD34BA5PLL1 514 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 RNF113AO15541 343 aaKnown RBP13.77□□□□□ -0.2
CPEB4-208ENST00000520867 MAP3K7O43318 606 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 COPB2P35606 906 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 ACADSBP45954 432 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 MDM2Q00987 491 aaPredicted RBP13.77□□□□□ -0.2
CPEB4-208ENST00000520867 MORC3Q14149 939 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 SUZ12Q15022 739 aaKnown RBP13.77□□□□□ -0.2
CPEB4-208ENST00000520867 PCSK7Q16549 785 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 SYCP2LQ5T4T6 812 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.2
CPEB4-208ENST00000520867 PPP1R42Q7Z4L9 355 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 RAVER1Q8IY67 606 aaKnown RBP13.77□□□□□ -0.2
CPEB4-208ENST00000520867 TMEM237Q96Q45 408 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 AS3MTQ9HBK9 375 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 KRT82Q9NSB4 513 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 MAP3K19Q56UN5 1328 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 ADAMTS12P58397 1594 aa13.77□□□□□ -0.2
CPEB4-208ENST00000520867 A0A0D9SFI3 127 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 SUN1O94901 812 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 PRKACBP22694 351 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 ITGA9Q13797 1035 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 CCDC6Q16204 474 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 KRT71Q3SY84 523 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 RABL6Q3YEC7 729 aaPredicted RBP13.77□□□□□ -0.21
CPEB4-208ENST00000520867 COBLL1Q53SF7 1204 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 C1orf228Q6PIY5 440 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 VPS36Q86VN1 386 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 DGCR14Q96DF8 476 aaKnown RBP13.77□□□□□ -0.21
CPEB4-208ENST00000520867 EPB41L1Q9H4G0 881 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 THAP9Q9H5L6 903 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 COMMD8Q9NX08 183 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 DIS3Q9Y2L1 958 aaKnown RBP13.77□□□□□ -0.21
CPEB4-208ENST00000520867 EID1Q9Y6B2 187 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 SH3PXD2BA1X283 911 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 O00370 1275 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 SEMA3EO15041 775 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 CYTH3O43739 400 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 HOXD13P35453 343 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 MMP13P45452 471 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 MXI1P50539 228 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 MGAT5Q09328 741 aa13.77□□□□□ -0.21
CPEB4-208ENST00000520867 SPATA1Q5VX52 437 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms