RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 FGFR1P11362 822 aa22.71■■□□□ 1.23
HDAC2-207ENST00000520170 RBM10P98175 930 aaKnown RBP22.71■■□□□ 1.23
HDAC2-207ENST00000520170 KRT32Q14532 448 aa22.71■■□□□ 1.23
HDAC2-207ENST00000520170 FAM43BQ6ZT52 329 aaPredicted RBP22.71■■□□□ 1.23
HDAC2-207ENST00000520170 COLGALT1Q8NBJ5 622 aa22.71■■□□□ 1.23
HDAC2-207ENST00000520170 CRYGNQ8WXF5 182 aa22.71■■□□□ 1.23
HDAC2-207ENST00000520170 BBXQ8WY36 941 aaPredicted RBP22.71■■□□□ 1.23
HDAC2-207ENST00000520170 EDAQ92838 391 aa22.71■■□□□ 1.23
HDAC2-207ENST00000520170 TBC1D22BQ9NU19 505 aa22.71■■□□□ 1.23
HDAC2-207ENST00000520170 TCEAL9Q9UHQ7 104 aa22.71■■□□□ 1.23
HDAC2-207ENST00000520170 USP15Q9Y4E8 981 aaPredicted RBP22.71■■□□□ 1.23
HDAC2-207ENST00000520170 MAFBQ9Y5Q3 323 aaPredicted RBP22.71■■□□□ 1.23
HDAC2-207ENST00000520170 CPA1P15085 419 aa22.7■■□□□ 1.22
HDAC2-207ENST00000520170 METAP2P50579 478 aaKnown RBP eCLIP22.7■■□□□ 1.22
HDAC2-207ENST00000520170 ERVFC1P60507 584 aa22.7■■□□□ 1.22
HDAC2-207ENST00000520170 NHLH1Q02575 133 aa22.7■■□□□ 1.22
HDAC2-207ENST00000520170 ZNF746Q6NUN9 644 aaPredicted RBP22.7■■□□□ 1.22
HDAC2-207ENST00000520170 KCNH6Q9H252 994 aa22.7■■□□□ 1.22
HDAC2-207ENST00000520170 C6orf50Q9HD87 102 aa22.7■■□□□ 1.22
HDAC2-207ENST00000520170 TMEM161AQ9NX61 479 aa22.7■■□□□ 1.22
HDAC2-207ENST00000520170 CCDC196A0A1B0GTZ2 297 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 LOC730098B7Z3J9 87 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 GPR32O75388 356 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 PSAPP07602 524 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 MRE11P49959 708 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 RCAN1P53805 252 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 SETQ01105 290 aaPredicted RBP22.69■■□□□ 1.22
HDAC2-207ENST00000520170 APOBRQ0VD83 1088 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 PRR16Q569H4 304 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 REXO1Q8N1G1 1221 aaKnown RBP22.69■■□□□ 1.22
HDAC2-207ENST00000520170 ZMYND12Q9H0C1 365 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 GABBR1Q9UBS5 961 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 SAMM50Q9Y512 469 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 PCDHA10Q9Y5I2 948 aa22.69■■□□□ 1.22
HDAC2-207ENST00000520170 ESYT2A0FGR8 921 aa22.68■■□□□ 1.22
HDAC2-207ENST00000520170 HMGB1P09429 215 aaKnown RBP22.68■■□□□ 1.22
HDAC2-207ENST00000520170 CLCN3P51790 818 aa22.68■■□□□ 1.22
HDAC2-207ENST00000520170 FAM189BP81408 668 aa22.68■■□□□ 1.22
HDAC2-207ENST00000520170 DUSP6Q16828 381 aa22.68■■□□□ 1.22
HDAC2-207ENST00000520170 MCTP2Q6DN12 878 aa22.68■■□□□ 1.22
HDAC2-207ENST00000520170 SMAP1Q8IYB5 467 aaPredicted RBP22.68■■□□□ 1.22
HDAC2-207ENST00000520170 VN1R2Q8NFZ6 395 aa22.68■■□□□ 1.22
HDAC2-207ENST00000520170 CCDC12Q8WUD4 166 aaPredicted RBP22.68■■□□□ 1.22
HDAC2-207ENST00000520170 RPGRIP1Q96KN7 1286 aa22.68■■□□□ 1.22
HDAC2-207ENST00000520170 CWH43Q9H720 699 aa22.68■■□□□ 1.22
HDAC2-207ENST00000520170 AKT3Q9Y243 479 aa22.68■■□□□ 1.22
HDAC2-207ENST00000520170 LAG3P18627 525 aa22.67■■□□□ 1.22
HDAC2-207ENST00000520170 NLRP11P59045 1033 aaKnown RBP22.67■■□□□ 1.22
HDAC2-207ENST00000520170 DSC3Q14574 896 aa22.67■■□□□ 1.22
HDAC2-207ENST00000520170 PLPP4Q5VZY2 271 aa22.67■■□□□ 1.22
HDAC2-207ENST00000520170 EFCAB12Q6NXP0 572 aa22.67■■□□□ 1.22
HDAC2-207ENST00000520170 Q6ZUG5 572 aa22.67■■□□□ 1.22
HDAC2-207ENST00000520170 RASGRP4Q8TDF6 673 aa22.67■■□□□ 1.22
HDAC2-207ENST00000520170 PHF7Q9BWX1 381 aaPredicted RBP22.67■■□□□ 1.22
HDAC2-207ENST00000520170 ELAC1Q9H777 363 aaKnown RBP22.67■■□□□ 1.22
HDAC2-207ENST00000520170 CEP131Q9UPN4 1083 aa22.67■■□□□ 1.22
HDAC2-207ENST00000520170 TMEM221A6NGB7 291 aa22.66■■□□□ 1.22
HDAC2-207ENST00000520170 M0R296 226 aa22.66■■□□□ 1.22
HDAC2-207ENST00000520170 MAGEB2O15479 319 aa22.66■■□□□ 1.22
HDAC2-207ENST00000520170 PKN1Q16512 942 aa22.66■■□□□ 1.22
HDAC2-207ENST00000520170 PDE12Q6L8Q7 609 aaKnown RBP22.66■■□□□ 1.22
HDAC2-207ENST00000520170 TRIM67Q6ZTA4 783 aa22.66■■□□□ 1.22
HDAC2-207ENST00000520170 LRRC71Q8N4P6 559 aa22.66■■□□□ 1.22
HDAC2-207ENST00000520170 BRF1Q92994 677 aa22.66■■□□□ 1.22
HDAC2-207ENST00000520170 PBXIP1Q96AQ6 731 aa22.66■■□□□ 1.22
HDAC2-207ENST00000520170 ZNF668Q96K58 619 aaPredicted RBP22.66■■□□□ 1.22
HDAC2-207ENST00000520170 MAP7D2Q96T17 732 aa22.66■■□□□ 1.22
HDAC2-207ENST00000520170 CDCA3Q99618 268 aaPredicted RBP22.66■■□□□ 1.22
HDAC2-207ENST00000520170 FSCN2O14926 492 aa22.65■■□□□ 1.22
HDAC2-207ENST00000520170 CDC45O75419 566 aa22.65■■□□□ 1.22
HDAC2-207ENST00000520170 ZSCAN20P17040 1043 aaPredicted RBP22.65■■□□□ 1.22
HDAC2-207ENST00000520170 GNA11P29992 359 aa22.65■■□□□ 1.22
HDAC2-207ENST00000520170 CBX2Q14781 532 aaPredicted RBP22.65■■□□□ 1.22
HDAC2-207ENST00000520170 LRRC55Q6ZSA7 311 aa22.65■■□□□ 1.22
HDAC2-207ENST00000520170 MRPS27Q92552 414 aaKnown RBP22.65■■□□□ 1.22
HDAC2-207ENST00000520170 PHKBQ93100 1093 aa22.65■■□□□ 1.22
HDAC2-207ENST00000520170 FAM167AQ96KS9 214 aa22.65■■□□□ 1.22
HDAC2-207ENST00000520170 CASD1Q96PB1 797 aa22.65■■□□□ 1.22
HDAC2-207ENST00000520170 TMEM117Q9H0C3 514 aa22.65■■□□□ 1.22
HDAC2-207ENST00000520170 ENTPD7Q9NQZ7 604 aa22.65■■□□□ 1.22
HDAC2-207ENST00000520170 PUF60Q9UHX1 559 aaKnown RBP22.65■■□□□ 1.22
HDAC2-207ENST00000520170 FSD2A1L4K1 749 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 PRPF3O43395 683 aaKnown RBP22.64■■□□□ 1.21
HDAC2-207ENST00000520170 TMOD1P28289 359 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 ZXDAP98168 799 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 AKAP17AQ02040 695 aaKnown RBP22.64■■□□□ 1.21
HDAC2-207ENST00000520170 BMP8AQ7Z5Y6 402 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 ABI1Q8IZP0 508 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 RNF169Q8NCN4 708 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 JAKMIP1Q96N16 626 aaKnown RBP22.64■■□□□ 1.21
HDAC2-207ENST00000520170 TCF25Q9BQ70 676 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 APOL5Q9BWW9 433 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 ADAMTS10Q9H324 1103 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 RNF19AQ9NV58 838 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 LZTS1Q9Y250 596 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 MYO10Q9HD67 2058 aa22.64■■□□□ 1.21
HDAC2-207ENST00000520170 WDR64B1ANS9 1081 aa22.63■■□□□ 1.21
HDAC2-207ENST00000520170 HOXA2O43364 376 aa22.63■■□□□ 1.21
HDAC2-207ENST00000520170 EIF4BP23588 611 aaKnown RBP22.63■■□□□ 1.21
HDAC2-207ENST00000520170 CIITAP33076 1130 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms