RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 WDR90Q96KV7 1748 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 GTPBP10A4D1E9 387 aaKnown RBP9.23□□□□□ -0.93
HMGB4-203ENST00000519684 RCCD1A6NED2 376 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 ZNF263O14978 683 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 RARRES1P49788 294 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 CYP2J2P51589 502 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 CKAP4Q07065 602 aaKnown RBP9.23□□□□□ -0.93
HMGB4-203ENST00000519684 RLFQ13129 1914 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 PLS1Q14651 629 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 GLIPR1L2Q4G1C9 344 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 HGSNATQ68CP4 663 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 CATSPERGQ6ZRH7 1159 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 TRAPPC11Q7Z392 1133 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 C4orf19Q8IY42 314 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 REPS2Q8NFH8 660 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 ACCSQ96QU6 501 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 TMEM206Q9H813 350 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 ACAD9Q9H845 621 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 AGPAT3Q9NRZ7 376 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 HOXC10Q9NYD6 342 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 AIPL1Q9NZN9 384 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 OGFRQ9NZT2 677 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 GCNT4Q9P109 453 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 RIPK3Q9Y572 518 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 SAR1BQ9Y6B6 198 aa9.23□□□□□ -0.93
HMGB4-203ENST00000519684 SSC5DA1L4H1 1573 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 MYPNQ86TC9 1320 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 ENC1O14682 589 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 ATP2A1O14983 1001 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 MAFGO15525 162 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 DKC1O60832 514 aaKnown RBP eCLIP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 ATP1A1P05023 1023 aaKnown RBP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 NR3C2P08235 984 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 PLS3P13797 630 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 PON1P27169 355 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 CLCN6P51797 869 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 AMPD2Q01433 879 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 ARID5AQ03989 594 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 GFPT1Q06210 699 aaPredicted RBP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 MAPK7Q13164 816 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 PRKG1Q13976 671 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 KLHDC7AQ5VTJ3 777 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 ZNF746Q6NUN9 644 aaPredicted RBP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 VSIG10LQ86VR7 867 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 KSR1Q8IVT5 923 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 FAM133AQ8N9E0 248 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 SLC17A8Q8NDX2 589 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 RBM46Q8TBY0 533 aaKnown RBP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 SLC35C1Q96A29 364 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 CDHR1Q96JP9 859 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 FIZ1Q96SL8 496 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 MAF1Q9H063 256 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 ANKEF1Q9NU02 776 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 ADAMTS5Q9UNA0 930 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 BZW2Q9Y6E2 419 aaKnown RBP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 SPDYE4A6NLX3 237 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 RBAK-RBAKDNI3L0D1 243 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 PJA2O43164 708 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 EXOC3O60645 756 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 ACTN1P12814 892 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 KRT13P13646 458 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 UCHL3P15374 230 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 SLC9A1P19634 815 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 APBA1Q02410 837 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 MYBPC2Q14324 1141 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 BMS1Q14692 1282 aaKnown RBP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 TMEM132BQ14DG7 1078 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 PPP2R5AQ15172 486 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 ASTE1Q2TB18 679 aaPredicted RBP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 XKR9Q5GH70 373 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 PAPD7Q5XG87 772 aaKnown RBP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 DAW1Q8N136 415 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 CAGE1Q8TC20 777 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 IWS1Q96ST2 819 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 DDX41Q9UJV9 622 aaKnown RBP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 ZNF214Q9UL59 606 aaPredicted RBP9.22□□□□□ -0.93
HMGB4-203ENST00000519684 AFG3L2Q9Y4W6 797 aa9.22□□□□□ -0.93
HMGB4-203ENST00000519684 BACH1O14867 736 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 TLR2O60603 784 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 ATP9AO75110 1047 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 PPP1R37O75864 691 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 STAM2O75886 525 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 MOCS3O95396 460 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 HIRAP54198 1017 aaPredicted RBP9.21□□□□□ -0.93
HMGB4-203ENST00000519684 NAP1L1P55209 391 aaKnown RBP9.21□□□□□ -0.93
HMGB4-203ENST00000519684 ENOX2Q16206 610 aaKnown RBP9.21□□□□□ -0.93
HMGB4-203ENST00000519684 UGCGQ16739 394 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 GNPTABQ3T906 1256 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 IQCEQ6IPM2 695 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 OTUD6AQ7L8S5 288 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 VPS36Q86VN1 386 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 SLC9A9Q8IVB4 645 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 SMAP1Q8IYB5 467 aaPredicted RBP9.21□□□□□ -0.93
HMGB4-203ENST00000519684 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.21□□□□□ -0.93
HMGB4-203ENST00000519684 ATP6V0A1Q93050 837 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 DCPSQ96C86 337 aaKnown RBP9.21□□□□□ -0.93
HMGB4-203ENST00000519684 NOX5Q96PH1 765 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 SENP7Q9BQF6 1050 aa9.21□□□□□ -0.93
HMGB4-203ENST00000519684 MOV10L1Q9BXT6 1211 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms