RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 GOLPH3LQ9H4A5 285 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 C11orf49Q9H6J7 331 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 PDLIM7Q9NR12 457 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 HDAC6Q9UBN7 1215 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 ODF2LQ9ULJ1 636 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 PCDHA2Q9Y5H9 948 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 MYH15Q9Y2K3 1946 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 SMIM35A0A1B0GVV1 85 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 ZBTB42B2RXF5 422 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 TLR3O15455 904 aaKnown RBP10.53□□□□□ -0.72
CLN8-203ENST00000518780 ACTN4O43707 911 aaKnown RBP10.53□□□□□ -0.72
CLN8-203ENST00000518780 CAND2O75155 1236 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 NR1I2O75469 434 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 KLRC1P26715 233 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 ABCD1P33897 745 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 NPEPPSP55786 919 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 MCM6Q14566 821 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 MXD4Q14582 209 aaPredicted RBP10.53□□□□□ -0.72
CLN8-203ENST00000518780 MTERF2Q49AM1 385 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 RINT1Q6NUQ1 792 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 MTHFD1LQ6UB35 978 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 C1orf186Q6ZWK4 172 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 ANKRD33Q7Z3H0 272 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 SH3RF1Q7Z6J0 888 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 UBE2Q1Q7Z7E8 422 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 RSPH3Q86UC2 560 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 LMBR1Q8WVP7 490 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 KIFAP3Q92845 792 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 DRC1Q96MC2 740 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 C7orf25Q9BPX7 421 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 ATP6V0A4Q9HBG4 840 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 SETD4Q9NVD3 440 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 DACT1Q9NYF0 836 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 SERTAD1Q9UHV2 236 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 TUBE1Q9UJT0 475 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 GRIN2DO15399 1336 aa10.53□□□□□ -0.72
CLN8-203ENST00000518780 PVALEFA0A1B0GWK0 134 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 DCDC2CA8MYV0 355 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 ZBTB39O15060 712 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 C22orf31O95567 290 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 SSBP05455 408 aaKnown RBP eCLIP10.52□□□□□ -0.73
CLN8-203ENST00000518780 LIG1P18858 919 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 CHMP4BP1P59074 171 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 POU5F1BQ06416 359 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 PTK7Q13308 1070 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 EMC2Q15006 297 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 PPP2R5AQ15172 486 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 FAM47CQ5HY64 1035 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 MARCH8Q5T0T0 291 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 PLA2G4FQ68DD2 849 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 SERINC5Q86VE9 423 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 GPBP1Q86WP2 473 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 TNS4Q8IZW8 715 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 CCDC155Q8N6L0 562 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 SLC17A8Q8NDX2 589 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 CCDC47Q96A33 483 aaKnown RBP10.52□□□□□ -0.73
CLN8-203ENST00000518780 SYAP1Q96A49 352 aaPredicted RBP10.52□□□□□ -0.73
CLN8-203ENST00000518780 PAGE5Q96GU1 130 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 PAWRQ96IZ0 340 aaKnown RBP10.52□□□□□ -0.73
CLN8-203ENST00000518780 MAP7D2Q96T17 732 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 MTRQ99707 1265 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 TRIM9Q9C026 710 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 LARSQ9P2J5 1176 aaKnown RBP10.52□□□□□ -0.73
CLN8-203ENST00000518780 SEL1LQ9UBV2 794 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 NOD1Q9Y239 953 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 COL4A3BPQ9Y5P4 624 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 PHLPP2Q6ZVD8 1323 aa10.52□□□□□ -0.73
CLN8-203ENST00000518780 H0YCG3 227 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 GTPBP6O43824 516 aaPredicted RBP10.51□□□□□ -0.73
CLN8-203ENST00000518780 SMC2O95347 1197 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 KRT18P05783 430 aaKnown RBP10.51□□□□□ -0.73
CLN8-203ENST00000518780 GAP43P17677 238 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 EN2P19622 333 aaPredicted RBP10.51□□□□□ -0.73
CLN8-203ENST00000518780 ZNF131P52739 623 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 IGBP1P78318 339 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 GIT2Q14161 759 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 PTGISQ16647 500 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 KLHL40Q2TBA0 621 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 ARSHQ5FYA8 562 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 GDF6Q6KF10 455 aaPredicted RBP10.51□□□□□ -0.73
CLN8-203ENST00000518780 EFCAB12Q6NXP0 572 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 TRMT1LQ7Z2T5 733 aaKnown RBP10.51□□□□□ -0.73
CLN8-203ENST00000518780 CCDC65Q8IXS2 484 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 FAM126BQ8IXS8 530 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 LINC01465Q8N7H1 131 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 LRRC15Q8TF66 581 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 PSPC1Q8WXF1 523 aaKnown RBP10.51□□□□□ -0.73
CLN8-203ENST00000518780 DDX12PQ92771 950 aa10.51□□□□□ -0.73
CLN8-203ENST00000518780 TMEM150BA6NC51 233 aa10.5□□□□□ -0.73
CLN8-203ENST00000518780 MYMKA6NI61 221 aa10.5□□□□□ -0.73
CLN8-203ENST00000518780 TREHO43280 583 aa10.5□□□□□ -0.73
CLN8-203ENST00000518780 USO1O60763 962 aaKnown RBP10.5□□□□□ -0.73
CLN8-203ENST00000518780 TBCAO75347 108 aaKnown RBP10.5□□□□□ -0.73
CLN8-203ENST00000518780 PARNO95453 639 aaKnown RBP10.5□□□□□ -0.73
CLN8-203ENST00000518780 CD4P01730 458 aa10.5□□□□□ -0.73
CLN8-203ENST00000518780 MAPTP10636 758 aaKnown RBP10.5□□□□□ -0.73
CLN8-203ENST00000518780 CYP2C9P11712 490 aa10.5□□□□□ -0.73
CLN8-203ENST00000518780 ARL2P36404 184 aa10.5□□□□□ -0.73
CLN8-203ENST00000518780 SMTNP53814 917 aa10.5□□□□□ -0.73
CLN8-203ENST00000518780 MDM2Q00987 491 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms