RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CUTAO60888 179 aa5.09□□□□□ -1.59
VPS13B-207ENST00000518569 KLHL18O94889 574 aa5.09□□□□□ -1.59
VPS13B-207ENST00000518569 PRPF6O94906 941 aaKnown RBP5.09□□□□□ -1.59
VPS13B-207ENST00000518569 INHBBP09529 407 aa5.09□□□□□ -1.59
VPS13B-207ENST00000518569 BCAR1P56945 870 aa5.09□□□□□ -1.59
VPS13B-207ENST00000518569 MAP3K12Q12852 859 aa5.09□□□□□ -1.59
VPS13B-207ENST00000518569 MOGSQ13724 837 aa5.09□□□□□ -1.59
VPS13B-207ENST00000518569 KIAA1841Q6NSI8 718 aa5.09□□□□□ -1.59
VPS13B-207ENST00000518569 RPUSD2Q8IZ73 545 aaKnown RBP5.09□□□□□ -1.59
VPS13B-207ENST00000518569 RPGRQ92834 1020 aaKnown RBP5.09□□□□□ -1.59
VPS13B-207ENST00000518569 ACAP3Q96P50 834 aa5.09□□□□□ -1.59
VPS13B-207ENST00000518569 L2HGDHQ9H9P8 463 aa5.09□□□□□ -1.59
VPS13B-207ENST00000518569 TYW1Q9NV66 732 aaKnown RBP5.09□□□□□ -1.59
VPS13B-207ENST00000518569 FTSJ1Q9UET6 329 aa5.09□□□□□ -1.59
VPS13B-207ENST00000518569 MSRAQ9UJ68 235 aa5.09□□□□□ -1.59
VPS13B-207ENST00000518569 B8ZZF3 427 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 DDX3XO00571 662 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS13B-207ENST00000518569 KDM1AO60341 852 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 PRKD3O94806 890 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 POLD1P28340 1107 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 RGS3P49796 1198 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 GUCY2FP51841 1108 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 CD83Q01151 205 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 ADCY2Q08462 1091 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 MYBPC3Q14896 1274 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 WDR72Q3MJ13 1102 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 PHF19Q5T6S3 580 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 PRAMEF9Q5VWM5 478 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 TMEM200BQ69YZ2 307 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 CXorf67Q86X51 503 aaPredicted RBP5.08□□□□□ -1.6
VPS13B-207ENST00000518569 REXO1L1PQ8IX06 675 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 ANKRD13AQ8IZ07 590 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 ADAMTS17Q8TE56 1095 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 AHCYL2Q96HN2 611 aaKnown RBP5.08□□□□□ -1.6
VPS13B-207ENST00000518569 MYL10Q9BUA6 226 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 LUC7LQ9NQ29 371 aaKnown RBP5.08□□□□□ -1.6
VPS13B-207ENST00000518569 HOMER2Q9NSB8 354 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 KCMF1Q9P0J7 381 aa5.08□□□□□ -1.6
VPS13B-207ENST00000518569 WASHC2CQ9Y4E1 1318 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 A0A0G2JNJ9 132 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 KRTAP9-7A8MTY7 169 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 ELL2O00472 640 aaPredicted RBP5.07□□□□□ -1.6
VPS13B-207ENST00000518569 SLURP1P55000 103 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 TOP3AQ13472 1001 aaPredicted RBP5.07□□□□□ -1.6
VPS13B-207ENST00000518569 GRAMD4Q6IC98 578 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 TTLL10Q6ZVT0 673 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 BMP8AQ7Z5Y6 402 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 ZNF761Q86XN6 746 aaPredicted RBP5.07□□□□□ -1.6
VPS13B-207ENST00000518569 KLHL36Q8N4N3 616 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 TXNDC5Q8NBS9 432 aaKnown RBP5.07□□□□□ -1.6
VPS13B-207ENST00000518569 RSAD2Q8WXG1 361 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 AJUBAQ96IF1 538 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 PITHD1Q9GZP4 211 aaPredicted RBP5.07□□□□□ -1.6
VPS13B-207ENST00000518569 KATNBL1Q9H079 304 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 TMEM168Q9H0V1 697 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 POFUT1Q9H488 388 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 TOPORSQ9NS56 1045 aaPredicted RBP5.07□□□□□ -1.6
VPS13B-207ENST00000518569 Q9UFV3 132 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 DENND2AQ9ULE3 1009 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 NUMBLQ9Y6R0 609 aa5.07□□□□□ -1.6
VPS13B-207ENST00000518569 NCANO14594 1321 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 MYPNQ86TC9 1320 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 A0A0A6YYJ9 748 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 A0A1B0GTL3 188 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 PRRG2O14669 202 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 CYP1A1P04798 512 aaPredicted RBP5.06□□□□□ -1.6
VPS13B-207ENST00000518569 MANFP55145 182 aaKnown RBP5.06□□□□□ -1.6
VPS13B-207ENST00000518569 CTSWP56202 376 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 ERVK-21P61565 698 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 KIAA2012Q0VF49 1180 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 NOLC1Q14978 699 aaKnown RBP eCLIP5.06□□□□□ -1.6
VPS13B-207ENST00000518569 EIF4HQ15056 248 aaKnown RBP5.06□□□□□ -1.6
VPS13B-207ENST00000518569 PDCD1Q15116 288 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 FSCN1Q16658 493 aaKnown RBP5.06□□□□□ -1.6
VPS13B-207ENST00000518569 DGKDQ16760 1214 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 CCDC178Q5BJE1 867 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 Q6ZUG5 572 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 SP8Q8IXZ3 490 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 IFNL2Q8IZJ0 200 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 CNTD1Q8N815 330 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 NUDT10Q8NFP7 164 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 LMBR1Q8WVP7 490 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 FERMT2Q96AC1 680 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 NUDT11Q96G61 164 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 ORAI2Q96SN7 254 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 SPATA25Q9BR10 227 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 HAPLN2Q9GZV7 340 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 SEMA4AQ9H3S1 761 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 MS4A5Q9H3V2 200 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 BARX1Q9HBU1 254 aaPredicted RBP5.06□□□□□ -1.6
VPS13B-207ENST00000518569 VTA1Q9NP79 307 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 ADAM29Q9UKF5 820 aa5.06□□□□□ -1.6
VPS13B-207ENST00000518569 ST20-MTHFSA0A0A6YYL1 179 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 PRSS38A1L453 326 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 LCHNA4D1U4 455 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 GOLGA8AA7E2F4 631 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 GOLGA8BA8MQT2 603 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 APOL3O95236 402 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 PFKMP08237 780 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms