RNA–Protein interactions for RNA: ENST00000518198.1

DENND3-205, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 1,848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-205	ENST00000518198	PDLIM7	Q9NR12	457 aa		27.58	■■■□□ 2.01
DENND3-205	ENST00000518198	PCDHB13	Q9Y5F0	798 aa		27.58	■■■□□ 2.01
DENND3-205	ENST00000518198	NKRF	O15226	690 aa	Known RBP eCLIP	27.57	■■■□□ 2
DENND3-205	ENST00000518198	PPP1R37	O75864	691 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	OAT	P04181	439 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	UBXN1	Q04323	297 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	HSDL1	Q3SXM5	330 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	C17orf99	Q6UX52	265 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	DHX37	Q8IY37	1157 aa	Known RBP	27.57	■■■□□ 2
DENND3-205	ENST00000518198	MAML3	Q96JK9	1138 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	GPR20	Q99678	358 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	GPRC5C	Q9NQ84	441 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	PYCARD	Q9ULZ3	195 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	ITIH6	Q6UXX5	1313 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	CALU	O43852	315 aa	Predicted RBP	27.57	■■■□□ 2
DENND3-205	ENST00000518198	TLR2	O60603	784 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	DGAT1	O75907	488 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	TPM2	P07951	284 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	SFPQ	P23246	707 aa	Known RBP eCLIP	27.57	■■■□□ 2
DENND3-205	ENST00000518198	ADAM9	Q13443	819 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	MIIP	Q5JXC2	388 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	FAM102B	Q5T8I3	360 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	FAM160B1	Q5W0V3	765 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	HHIPL1	Q96JK4	782 aa		27.57	■■■□□ 2
DENND3-205	ENST00000518198	NOC4L	Q9BVI4	516 aa	Known RBP	27.57	■■■□□ 2
DENND3-205	ENST00000518198	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	27.57	■■■□□ 2
DENND3-205	ENST00000518198	RBM47	A0AV96	593 aa	Known RBP	27.56	■■■□□ 2
DENND3-205	ENST00000518198	TMEM88B	A6NKF7	163 aa		27.56	■■■□□ 2
DENND3-205	ENST00000518198	STAT5B	P51692	787 aa		27.56	■■■□□ 2
DENND3-205	ENST00000518198	SREBF2	Q12772	1141 aa		27.56	■■■□□ 2
DENND3-205	ENST00000518198	TMEM63B	Q5T3F8	832 aa		27.56	■■■□□ 2
DENND3-205	ENST00000518198	COPS5	Q92905	334 aa		27.56	■■■□□ 2
DENND3-205	ENST00000518198	KATNBL1	Q9H079	304 aa		27.56	■■■□□ 2
DENND3-205	ENST00000518198	ZNF236	Q9UL36	1845 aa		27.56	■■■□□ 2
DENND3-205	ENST00000518198	TGFB1I1	O43294	461 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	GNA14	O95837	355 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	SNAI1	O95863	264 aa	Predicted RBP	27.55	■■■□□ 2
DENND3-205	ENST00000518198	DNM2	P50570	870 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	NIFK	Q9BYG3	293 aa	Known RBP	27.55	■■■□□ 2
DENND3-205	ENST00000518198	ZMYM2	Q9UBW7	1377 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	NOP56	O00567	594 aa	Known RBP	27.55	■■■□□ 2
DENND3-205	ENST00000518198	CETN3	O15182	167 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	NR2F2	P24468	414 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	MARS	P56192	900 aa	Known RBP	27.55	■■■□□ 2
DENND3-205	ENST00000518198	CCZ1B	P86790	482 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	CCZ1	P86791	482 aa	Predicted RBP	27.55	■■■□□ 2
DENND3-205	ENST00000518198	ALCAM	Q13740	583 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	MTERF2	Q49AM1	385 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	MCPH1	Q8NEM0	835 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	NPLOC4	Q8TAT6	608 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	KIFAP3	Q92845	792 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198	SPATA33	Q96N06	139 aa		27.55	■■■□□ 2
DENND3-205	ENST00000518198		A0A1W2PQC6	194 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198		K7ENM7	598 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198	PES1	O00541	588 aa	Known RBP	27.54	■■■□□ 2
DENND3-205	ENST00000518198	ZNF500	O60304	480 aa	Predicted RBP	27.54	■■■□□ 2
DENND3-205	ENST00000518198	LGR5	O75473	907 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198	TM4SF4	P48230	202 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198	MORN1	Q5T089	497 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198	KSR1	Q8IVT5	923 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198	KIAA1524	Q8TCG1	905 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198	ST6GALNAC4	Q9H4F1	302 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198	ZFYVE28	Q9HCC9	887 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198	XPNPEP1	Q9NQW7	623 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198	NRBP2	Q9NSY0	501 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198	SLC5A4	Q9NY91	659 aa		27.54	■■■□□ 2
DENND3-205	ENST00000518198	PEX3	P56589	373 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	MAN2A1	Q16706	1144 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	TINF2	Q9BSI4	451 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	AZI2	Q9H6S1	392 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	DOCK3	Q8IZD9	2030 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	SKIL	P12757	684 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	NCKAP1L	P55160	1127 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	NFIL3	Q16649	462 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	CCDC40	Q4G0X9	1142 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	VWA3B	Q502W6	1294 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	CEP135	Q66GS9	1140 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	CEP89	Q96ST8	783 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	C17orf75	Q9HAS0	396 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	ATP6V0A4	Q9HBG4	840 aa		27.53	■■■□□ 2
DENND3-205	ENST00000518198	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	27.53	■■■□□ 2
DENND3-205	ENST00000518198	NR3C1	P04150	777 aa		27.52	■■■□□ 2
DENND3-205	ENST00000518198	RPL13	P26373	211 aa	Known RBP	27.52	■■■□□ 2
DENND3-205	ENST00000518198	GOLGA8F	Q08AF8	430 aa		27.52	■■■□□ 2
DENND3-205	ENST00000518198	GOLGA8DP	Q0D2H9	430 aa		27.52	■■■□□ 2
DENND3-205	ENST00000518198	TBC1D8B	Q0IIM8	1120 aa		27.52	■■■□□ 2
DENND3-205	ENST00000518198	TC2N	Q8N9U0	490 aa		27.52	■■■□□ 2
DENND3-205	ENST00000518198	SLC17A8	Q8NDX2	589 aa		27.52	■■■□□ 2
DENND3-205	ENST00000518198	ZIC5	Q96T25	663 aa		27.52	■■■□□ 2
DENND3-205	ENST00000518198	IKZF4	Q9H2S9	585 aa		27.52	■■■□□ 2
DENND3-205	ENST00000518198	NDST4	Q9H3R1	872 aa		27.52	■■■□□ 2
DENND3-205	ENST00000518198	SOX10	P56693	466 aa		27.51	■■□□□ 1.99
DENND3-205	ENST00000518198	GTF2B	Q00403	316 aa		27.51	■■□□□ 1.99
DENND3-205	ENST00000518198	ARHGAP1	Q07960	439 aa		27.51	■■□□□ 1.99
DENND3-205	ENST00000518198	TARBP2	Q15633	366 aa	Known RBP	27.51	■■□□□ 1.99
DENND3-205	ENST00000518198	PLPPR4	Q7Z2D5	763 aa		27.51	■■□□□ 1.99
DENND3-205	ENST00000518198	HAUS6	Q7Z4H7	955 aa		27.51	■■□□□ 1.99
DENND3-205	ENST00000518198	PPFIBP1	Q86W92	1011 aa		27.51	■■□□□ 1.99
DENND3-205	ENST00000518198	MSL3	Q8N5Y2	521 aa	Known RBP	27.51	■■□□□ 1.99
DENND3-205	ENST00000518198	NTPCR	Q9BSD7	190 aa	Known RBP	27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms