RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 PSAPP07602 524 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 ATP4AP20648 1035 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 GTF2F1P35269 517 aaKnown RBP eCLIP11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 NBL1P41271 181 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 ANKRD1Q15327 319 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 TSHZ1Q6ZSZ6 1077 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 CCDC60Q8IWA6 550 aaPredicted RBP11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 BLIDQ8IZY5 108 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 DAGLBQ8NCG7 672 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 TBCKQ8TEA7 893 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 TRAPPC12Q8WVT3 735 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 LENG9Q96B70 501 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 YME1L1Q96TA2 773 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 RIT2Q99578 217 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 CELF4Q9BZC1 486 aaKnown RBP11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 TPCN1Q9ULQ1 816 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 MAFBQ9Y5Q3 323 aaPredicted RBP11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 TRPV2Q9Y5S1 764 aa11.96□□□□□ -0.49
PDGFRB-203ENST00000517660 CACNA1BQ00975 2339 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 LOC730098B7Z3J9 87 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 M0R2N6 131 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 MSH4O15457 936 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 LINC01565O15544 149 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 UPP2O95045 317 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 SCRN1Q12765 414 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 SMAD4Q13485 552 aaKnown RBP11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 GPM6BQ13491 265 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 PTPROQ16827 1216 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 Q4G0T1 1027 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 FAM43BQ6ZT52 329 aaPredicted RBP11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 CKAP2LQ8IYA6 745 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 BBXQ8WY36 941 aaPredicted RBP11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 IL17RAQ96F46 866 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 AIFM3Q96NN9 605 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 AGO3Q9H9G7 860 aaKnown RBP11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 SAMM50Q9Y512 469 aa11.95□□□□□ -0.5
PDGFRB-203ENST00000517660 PTPRZ1P23471 2315 aaPredicted RBP11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 COL1A2P08123 1366 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 KDM3AQ9Y4C1 1321 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 FRYLO94915 3013 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 CYP3A7-CYP3A51PA0A087WV96 503 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 WDR64B1ANS9 1081 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 LINC00271P0C7V0 271 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 XBP1P17861 261 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 CYP3A7P24462 503 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 CD52P31358 61 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 AK2P54819 239 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 TMEM62Q0P6H9 643 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 CBX2Q14781 532 aaPredicted RBP11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 NONOQ15233 471 aaKnown RBP eCLIP11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 NPY5RQ15761 445 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 KRT25Q7Z3Z0 450 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 KIAA0319LQ8IZA0 1049 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 SLC5A5Q92911 643 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 MSLNLQ96KJ4 702 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 CNTNAP3BQ96NU0 1288 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 SAMD11Q96NU1 681 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 TEKT3Q9BXF9 490 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 FTHL17Q9BXU8 183 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 CNTNAP3Q9BZ76 1288 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 DISC1Q9NRI5 854 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 NRBP2Q9NSY0 501 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 GABBR1Q9UBS5 961 aa11.94□□□□□ -0.5
PDGFRB-203ENST00000517660 STK36Q9NRP7 1315 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 ZBTB42B2RXF5 422 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 MAGEB2O15479 319 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 GAS7O60861 476 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 SFNP31947 248 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 JAK3P52333 1124 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 SIGLEC14Q08ET2 396 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 LRCH2Q5VUJ6 765 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 MOXD1Q6UVY6 613 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 WASF1Q92558 559 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 RMDN1Q96DB5 314 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 FAM167AQ96KS9 214 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 MBOAT7Q96N66 472 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 PHF20Q9BVI0 1012 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 IRF2BPLQ9H1B7 796 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 PADI3Q9ULW8 664 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 KCNJ14Q9UNX9 436 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 CEP131Q9UPN4 1083 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 GVINP1Q7Z2Y8 2422 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 ZNF292O60281 2723 aa11.93□□□□□ -0.5
PDGFRB-203ENST00000517660 IGSF9BQ9UPX0 1349 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 PSMD10O75832 226 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 CTDNEP1O95476 244 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 TDP2O95551 362 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 C22orf31O95567 290 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 PAK2Q13177 524 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 ODR4Q5SWX8 454 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 TRMT1LQ7Z2T5 733 aaKnown RBP11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 FRMD5Q7Z6J6 570 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 RTN4RL1Q86UN2 441 aaPredicted RBP11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 ADSSL1Q8N142 457 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 FIBCD1Q8N539 461 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 RDM1Q8NG50 284 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 UNC45AQ9H3U1 944 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms