RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 LMNB2Q03252 620 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ZNF844Q08AG5 666 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 LRP10Q7Z4F1 713 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 IRF2BP1Q8IU81 584 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 TPH2Q8IWU9 490 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 NSMCE1Q8WV22 266 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 NSUN4Q96CB9 384 aaKnown RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 BICD1Q96G01 975 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 TMOD2Q9NZR1 351 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 TPX2Q9ULW0 747 aaKnown RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 SIK3Q9Y2K2 1263 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 SPATA31A3Q5VYP0 1347 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ZSCAN5CA6NGD5 496 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 E9PMD0 336 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ASAP2O43150 1006 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 PHBP35232 272 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 RWDD2BP57060 319 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 PTK2Q05397 1052 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 NR1H3Q13133 447 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 C12orf60Q5U649 245 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ZNF34Q8IZ26 560 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 TEX9Q8N6V9 391 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 RDH13Q8NBN7 331 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 TPCN2Q8NHX9 752 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 MRRFQ96E11 262 aaKnown RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 CFAP57Q96MR6 1250 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ROPN1BQ9BZX4 212 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 YIPF3Q9GZM5 350 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 PABPC3Q9H361 631 aaKnown RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ROPN1Q9HAT0 212 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 TMEM260Q9NX78 707 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 SLC16A3O15427 465 aaKnown RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 KLRC4O43908 158 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 PHF2O75151 1096 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 SCP2P22307 547 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 VPS41P49754 854 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ERVK-9P63128 1117 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 NKX1-1Q15270 411 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 WDR44Q5JSH3 913 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 SPDYCQ5MJ68 293 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 RCSD1Q6JBY9 416 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 DPP8Q6V1X1 898 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 TRMT10CQ7L0Y3 403 aaKnown RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 MDM1Q8TC05 714 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 KAT2BQ92831 832 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 TGS1Q96RS0 853 aaKnown RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 IWS1Q96ST2 819 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ETNK1Q9HBU6 452 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 F8W031 263 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 PDXKO00764 312 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 UFL1O94874 794 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 TDP2O95551 362 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 RFC4P35249 363 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 SOX5P35711 763 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 GALCP54803 685 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 NPEPPSP55786 919 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 SESN3P58005 492 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ZNF211Q13398 564 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 UBE2SQ16763 222 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 MIIPQ5JXC2 388 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 PPP4R4Q6NUP7 873 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 ZNF572Q7Z3I7 529 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-203ENST00000517490 LRRC34Q8IZ02 419 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 PCDHGC5Q9Y5F6 944 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 PCDHA1Q9Y5I3 950 aa7.18□□□□□ -1.26
CPNE3-203ENST00000517490 DCCP43146 1447 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 RASSF10A6NK89 507 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 TCP11X1B4DZS4 312 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 PEX14O75381 377 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 BRAFP15056 766 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 PRDX5P30044 214 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 GPC5P78333 572 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 TMED2Q15363 201 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 CCDC137Q6PK04 289 aaKnown RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 SFR1Q86XK3 245 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 JAMLQ86YT9 394 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 ZNF653Q96CK0 615 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 FAM84BQ96KN1 310 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 RIOK1Q9BRS2 568 aaKnown RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 STOML1Q9UBI4 398 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 NAGPAQ9UK23 515 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 MINPP1Q9UNW1 487 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 LEMD3Q9Y2U8 911 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 NALCNQ8IZF0 1738 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 FAM205AQ6ZU69 1335 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 MST1RQ04912 1400 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 F8VZ95 297 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 I3L4J1 428 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 LRRN2O75325 713 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 TTLL1O95922 423 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 NQO1P15559 274 aaKnown RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 SMARCA1P28370 1054 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 MFAP3P55082 362 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 GRB10Q13322 594 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 SPARCL1Q14515 664 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 UAP1Q16222 522 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 ERFEQ4G0M1 354 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 GLYCTKQ8IVS8 523 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 VGLL2Q8N8G2 317 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 KIAA0895Q8NCT3 520 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms