RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
SCARNA16.1-201ENST00000516133 NOL7Q9UMY1 257 aaKnown RBP12.56□□□□□ -0.4
SCARNA16.1-201ENST00000516133 AKT3Q9Y243 479 aa12.56□□□□□ -0.4
SCARNA16.1-201ENST00000516133 IGKV6-21A0A0C4DH24 114 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 GPR32O75388 356 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 MAFO75444 373 aaPredicted RBP12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 SLITRK3O94933 977 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 UPP2O95045 317 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 VTNP04004 478 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 CLCN3P51790 818 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 NLRP11P59045 1033 aaKnown RBP12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 NFX1Q12986 1120 aaKnown RBP12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 TPH2Q8IWU9 490 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 LRRC71Q8N4P6 559 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 NEK9Q8TD19 979 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 SLC7A3Q8WY07 619 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 CEP89Q96ST8 783 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 YME1L1Q96TA2 773 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 EIF2AK1Q9BQI3 630 aaKnown RBP12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 LXNQ9BS40 222 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 TSPYL2Q9H2G4 693 aaPredicted RBP12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 CDHR5Q9HBB8 845 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 CYP26B1Q9NR63 512 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 RGL1Q9NZL6 768 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 ST3GAL5Q9UNP4 418 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 SMC3Q9UQE7 1217 aa12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 NOC2LQ9Y3T9 749 aaKnown RBP12.55□□□□□ -0.4
SCARNA16.1-201ENST00000516133 WDR81Q562E7 1941 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 LCHNA4D1U4 455 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 H3BQV1 296 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 WNT7AO00755 349 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 LYPLA2O95372 231 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 EIF4BP23588 611 aaKnown RBP12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 GJB2P29033 226 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 YWHABP31946 246 aaKnown RBP12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 ERVK-21P61565 698 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 ZNF174Q15697 407 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 TTC38Q5R3I4 469 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 RTN4RL1Q86UN2 441 aaPredicted RBP12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 MAFAQ8NHW3 353 aaPredicted RBP12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 TMEM40Q8WWA1 233 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 ARNTL2Q8WYA1 636 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 DYDC2Q96IM9 177 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 CEP170P1Q96L14 293 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 TGS1Q96RS0 853 aaKnown RBP12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 OSMRQ99650 979 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 ADAMTS10Q9H324 1103 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 ERVK-5Q9HDB9 667 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 MICAL3Q7RTP6 2002 aa12.54□□□□□ -0.4
SCARNA16.1-201ENST00000516133 CUL9Q8IWT3 2517 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 DENND3A2RUS2 1198 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 LINC01553A4QN01 128 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 TMEM150BA6NC51 233 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 OR52Z1P0C646 297 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 STAG3L1P0CL83 205 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 XRCC6P12956 609 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 POU3F3P20264 500 aaPredicted RBP12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 IGFBP4P22692 258 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 RFC5P40937 340 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 GPC3P51654 580 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 NPEPPSP55786 919 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 CYP4A11Q02928 519 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 ADGRE1Q14246 886 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 CTTNQ14247 550 aaKnown RBP12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 TMEM266Q2M3C6 531 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 MCTP1Q6DN14 999 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 SLC24A5Q71RS6 500 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 SLC17A8Q8NDX2 589 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 SP7Q8TDD2 431 aaPredicted RBP12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 SCLT1Q96NL6 688 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 SAMD11Q96NU1 681 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 SH2D3AQ9BRG2 576 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 GCOM2Q9BZD3 368 aaPredicted RBP12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 INO80BQ9C086 356 aaPredicted RBP12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 TMEM60Q9H2L4 133 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 TMX1Q9H3N1 280 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 CERS4Q9HA82 394 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 C1orf112Q9NSG2 853 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 ANKEF1Q9NU02 776 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 SUCLA2Q9P2R7 463 aaPredicted RBP12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 WRAP73Q9P2S5 460 aaPredicted RBP12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 TTC3P53804 2025 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 GBF1Q92538 1859 aa12.53□□□□□ -0.4
SCARNA16.1-201ENST00000516133 GTPBP6O43824 516 aaPredicted RBP12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 GAS2O43903 313 aaKnown RBP12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 ARHGEF15O94989 841 aa12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 DARSP14868 501 aaKnown RBP12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 TECP42680 631 aa12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 POLGP54098 1239 aaPredicted RBP12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 PDIA5Q14554 519 aa12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 RILPL1Q5EBL4 403 aa12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 XKR9Q5GH70 373 aa12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 LARP1BQ659C4 914 aaKnown RBP12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 PLA2G4FQ68DD2 849 aa12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 ZNF410Q86VK4 478 aa12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 CRIPAKQ8N1N5 446 aa12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 ERMNQ8TAM6 284 aa12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 TCP11Q8WWU5 503 aa12.52□□□□□ -0.41
SCARNA16.1-201ENST00000516133 NLRP7Q8WX94 980 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms