RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 DYNC1LI1Q9Y6G9 523 aaKnown RBP-0.57□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CPAMD8Q8IZJ3 1885 aa-0.57□□□□□ -2.5
SCARNA20.2-201ENST00000516052 GBF1Q92538 1859 aa-0.57□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FMN1Q68DA7 1419 aa-0.57□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SPTA1P02549 2419 aa-0.57□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LAMB1P07942 1786 aa-0.57□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FLT1P17948 1338 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 WDR17Q8IZU2 1322 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 COL5A2P05997 1499 aaPredicted RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 EVPLQ92817 2033 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RBMY1BA6NDE4 496 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RBMY1EA6NEQ0 496 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TMEM191CA6NGB0 347 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MROH6A6NGR9 719 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MYMKA6NI61 221 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FAM90A8PA6NJQ4 464 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 C2CD4BA6NLJ0 364 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FOXO6A8MYZ6 492 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 A8MZ25 164 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 C3orf80F5H4A9 247 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PANO1I0J062 215 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SLC33A1O00400 549 aaPredicted RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 WNT7AO00755 349 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FFAR3O14843 346 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 WNT9AO14904 365 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CTAGE5O15320 804 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 KCNN4O15554 427 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SLC28A2O43868 658 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RNASEH2AO75792 299 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DGKIO75912 1065 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PAK3O75914 559 aaPredicted RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 KBTBD11O94819 623 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RHOBTB3O94955 611 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SCELO95171 688 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ATG7O95352 703 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 S1PR4O95977 384 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TSHBP01222 138 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CD8AP01732 235 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 KLKB1P03952 638 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SLC4A2P04920 1241 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RBMY1DP0C7P1 496 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FAM90A13PP0C7W8 464 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FAM90A24PP0C7X0 464 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PRR35P0CG20 571 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CFC1BP0CG36 223 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RBMY1A1P0DJD3 496 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RBMY1CP0DJD4 496 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 T-ENOLP0DO92 83 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RNASE2P10153 161 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CD8BP10966 210 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 VDRP11473 427 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CD19P15391 556 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 GATA1P15976 413 aaPredicted RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CRISP2P16562 243 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZNF17P17021 662 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 NPR3P17342 541 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 HNF1AP20823 631 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 GPTP24298 496 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ACVR2AP27037 513 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ITPKBP27987 946 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SSTR1P30872 391 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CDH5P33151 784 aaPredicted RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 HSPA4P34932 840 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MPLP40238 635 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 NBL1P41271 181 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MAP2K3P46734 347 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 GLIPR1P48060 266 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ATP12AP54707 1039 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 HUNKP57058 714 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SPINK7P58062 85 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DEFA1P59665 94 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DEFA3P59666 94 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 NTHL1P78549 312 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RPL36AP83881 106 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PSG6Q00889 435 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 AKAP17AQ02040 695 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CNTN2Q02246 1040 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PAX5Q02548 391 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MAP2K1Q02750 393 aaPredicted RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CFHR3Q02985 330 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 OCA2Q04671 838 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 KRT17Q04695 432 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DLX2Q07687 328 aaPredicted RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FAM27E3Q08E93 113 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 BNIP3Q12983 259 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SNW1Q13573 536 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TUBA3CQ13748 450 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 BMPR2Q13873 1038 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DHX34Q14147 1143 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RBMY1FQ15415 496 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SAFBQ15424 915 aaKnown RBP eCLIP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TARBP2Q15633 366 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZRSR2Q15696 482 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SMAD2Q15796 467 aaKnown RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ASIC2Q16515 512 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LY6EQ16553 131 aa-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SRSF7Q16629 238 aaKnown RBP eCLIP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RSPO1Q2MKA7 263 aaPredicted RBP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZNF800Q2TB10 664 aaPredicted RBP eCLIP-0.58□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ASB16-AS1Q495Z4 193 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms