RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 VPS16Q9H269 839 aa8.43□□□□□ -1.06
SCARNA20.1-201ENST00000516009 KCTD10Q9H3F6 313 aa8.43□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ABHD16BQ9H3Z7 469 aa8.43□□□□□ -1.06
SCARNA20.1-201ENST00000516009 RTN4Q9NQC3 1192 aaKnown RBP8.43□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CYP26B1Q9NR63 512 aa8.43□□□□□ -1.06
SCARNA20.1-201ENST00000516009 NRBP2Q9NSY0 501 aa8.43□□□□□ -1.06
SCARNA20.1-201ENST00000516009 TAB2Q9NYJ8 693 aa8.43□□□□□ -1.06
SCARNA20.1-201ENST00000516009 NRBP1Q9UHY1 535 aa8.43□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PCDHB13Q9Y5F0 798 aa8.43□□□□□ -1.06
SCARNA20.1-201ENST00000516009 K7ENM7 598 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 TNPO2O14787 897 aaKnown RBP8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CETN3O15182 167 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 LGR5O75473 907 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 GNA14O95837 355 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 HOXC6P09630 235 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PLS3P13797 630 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PRKCSHP14314 528 aaPredicted RBP8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ATP4AP20648 1035 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PTGS1P23219 599 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 NMT1P30419 496 aaKnown RBP8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 RGS2P41220 211 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ADCYAP1R1P41586 468 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 MTIF2P46199 727 aaKnown RBP8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 SLC26A2P50443 739 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 POLGP54098 1239 aaPredicted RBP8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 GSDMDP57764 484 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ARHGAP1Q07960 439 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ACVR2BQ13705 512 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 DEFB115Q30KQ5 88 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 EDRF1Q3B7T1 1238 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CCDC144BQ3MJ40 725 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 HSDL1Q3SXM5 330 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 LRRC55Q6ZSA7 311 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 HS2ST1Q7LGA3 356 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PLPPR4Q7Z2D5 763 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ZNF720Q7Z2F6 126 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 GLG1Q92896 1179 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 COPS5Q92905 334 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 EEF2KMTQ96G04 330 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CEP63Q96MT8 703 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ZIC5Q96T25 663 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PCYT2Q99447 389 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 NIFKQ9BYG3 293 aaKnown RBP8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 KATNBL1Q9H079 304 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 SMARCAD1Q9H4L7 1026 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 C17orf75Q9HAS0 396 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ATP6V0A4Q9HBG4 840 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 TYW1Q9NV66 732 aaKnown RBP8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 INTS13Q9NVM9 706 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ZHX1Q9UKY1 873 aaPredicted RBP8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 TRAF3IP3Q9Y228 551 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PPME1Q9Y570 386 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 EMSYQ7Z589 1322 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ZSWIM8A7E2V4 1837 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 KAT6AQ92794 2004 aa8.42□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CASP8AP2Q9UKL3 1982 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 RASSF10A6NK89 507 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 LGALS16A8MUM7 142 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PES1O00541 588 aaKnown RBP8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 NKRFO15226 690 aaKnown RBP eCLIP8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 TEX33O43247 280 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PPP1R37O75864 691 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CYP2B6P20813 491 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 NR2F2P24468 414 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 MSNP26038 577 aaKnown RBP8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 RPL13P26373 211 aaKnown RBP8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 HOXD13P35453 343 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 RFC5P40937 340 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 DNM2P50570 870 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 SMTNP53814 917 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PEX3P56589 373 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 RTP1P59025 263 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 UBXN1Q04323 297 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 DMP1Q13316 513 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 IRF5Q13568 498 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 EMC2Q15006 297 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CCDC40Q4G0X9 1142 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ZC2HC1CQ53FD0 456 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 TMEM63BQ5T3F8 832 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 SPECC1LQ69YQ0 1117 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 IQSEC1Q6DN90 963 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ZSCAN30Q86W11 494 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ZC3H3Q8IXZ2 948 aaKnown RBP8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 SYCP3Q8IZU3 236 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CCDC150Q8NCX0 1101 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 GOLGA5Q8TBA6 731 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ATP8B4Q8TF62 1192 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 SLC7A3Q8WY07 619 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 BBXQ8WY36 941 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 USP6NLQ92738 828 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 EMID1Q96A84 441 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CAPNS2Q96L46 248 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 IFT74Q96LB3 600 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 FIZ1Q96SL8 496 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 APBA2Q99767 749 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 TUBGCP2Q9BSJ2 902 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 ST6GALNAC4Q9H4F1 302 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 GPRC5CQ9NQ84 441 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 PDLIM7Q9NR12 457 aa8.41□□□□□ -1.06
SCARNA20.1-201ENST00000516009 CREBZFQ9NS37 354 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms