RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 FAM217BQ9NTX9 383 aaPredicted RBP11.8□□□□□ -0.52
TRIM41-209ENST00000515834 INTUQ9ULD6 942 aa11.8□□□□□ -0.52
TRIM41-209ENST00000515834 SRGAP2O75044 1071 aa11.8□□□□□ -0.52
TRIM41-209ENST00000515834 TADA2AO75478 443 aa11.8□□□□□ -0.52
TRIM41-209ENST00000515834 CPVLQ9H3G5 476 aa11.8□□□□□ -0.52
TRIM41-209ENST00000515834 GTSE1Q9NYZ3 720 aa11.8□□□□□ -0.52
TRIM41-209ENST00000515834 INSRP06213 1382 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 CYBBP04839 570 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 LCP1P13796 627 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 PRELPP51888 382 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 RNF135Q8IUD6 432 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 PIH1D3Q9NQM4 214 aaKnown RBP11.79□□□□□ -0.52
TRIM41-209ENST00000515834 TPX2Q9ULW0 747 aaKnown RBP11.79□□□□□ -0.52
TRIM41-209ENST00000515834 PTPRKQ15262 1439 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 A0A0G2JLW4 131 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 EXOC1LA0A1B0GW35 172 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 GOLGA8MH3BSY2 632 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 ALDH1A1P00352 501 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 RALAP11233 206 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 CHRNA5P30532 468 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 ST8SIA6P61647 398 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 POU5F1BQ06416 359 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 TMCO5AQ8N6Q1 288 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 CEP19Q96LK0 163 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 ACAP3Q96P50 834 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 AP1M1Q9BXS5 423 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 ERVV-1B6SEH8 477 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 HSPA4LO95757 839 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 HMBSP08397 361 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 RAD51Q06609 339 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 ZC3H12BQ5HYM0 836 aaKnown RBP11.79□□□□□ -0.52
TRIM41-209ENST00000515834 TMEM270Q6UE05 265 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 FAF1Q9UNN5 650 aaPredicted RBP11.79□□□□□ -0.52
TRIM41-209ENST00000515834 UBE4BO95155 1302 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 RPS6KA4O75676 772 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 PLEKHA8P1O95397 391 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 RASGRF1Q13972 1273 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 HLFQ16534 295 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 SLC35F6Q8N357 371 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 RMDN1Q96DB5 314 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 KIF12Q96FN5 646 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 RPAP3Q9H6T3 665 aaPredicted RBP11.79□□□□□ -0.52
TRIM41-209ENST00000515834 SUN2Q9UH99 717 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 PCDHA5Q9Y5H7 936 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 PIK3R2O00459 728 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 SUN1O94901 812 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 BRD1O95696 1058 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 MMP1P03956 469 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
TRIM41-209ENST00000515834 TAF11Q15544 211 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 BTBD8Q5XKL5 378 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 DYDC2Q96IM9 177 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 EFHD1Q9BUP0 239 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 KLC2Q9H0B6 622 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 COPRSQ9NQ92 184 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 PIN4Q9Y237 131 aaKnown RBP11.79□□□□□ -0.52
TRIM41-209ENST00000515834 ERBB3P21860 1342 aa11.79□□□□□ -0.52
TRIM41-209ENST00000515834 ADCK2Q7Z695 626 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 FBXO18Q8NFZ0 1043 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 SLC26A7Q8TE54 656 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 SENP1Q9P0U3 644 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 JRKLQ9Y4A0 524 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 CYP2B6P20813 491 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 CA4P22748 312 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 ADCK5Q3MIX3 580 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 SRRM1Q8IYB3 904 aaKnown RBP11.78□□□□□ -0.52
TRIM41-209ENST00000515834 TRAIPQ9BWF2 469 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 POLR3FQ9H1D9 316 aaPredicted RBP11.78□□□□□ -0.52
TRIM41-209ENST00000515834 LMBRD1Q9NUN5 540 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 TJP2Q9UDY2 1190 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 MAN1B1Q9UKM7 699 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 KIAA0556O60303 1618 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 A8MXQ7 604 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 USP17L15C9J2P7 530 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 USP17L13C9JLJ4 530 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 USP17L11C9JVI0 530 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 USP17L18D6R9N7 530 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 USP17L22D6RA61 530 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 USP17L17D6RBQ6 530 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 USP17L19D6RCP7 530 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 USP17L20D6RJB6 530 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 PRRG1O14668 218 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 USP17L24Q0WX57 530 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 ALCAMQ13740 583 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 USP17L6PQ6QN14 398 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 SPATA2LQ8IUW3 424 aaPredicted RBP11.78□□□□□ -0.52
TRIM41-209ENST00000515834 PIP4K2CQ8TBX8 421 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 MTMR6Q9Y217 621 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 C6orf222P0C671 652 aaPredicted RBP11.78□□□□□ -0.52
TRIM41-209ENST00000515834 TOGARAM2Q6ZUX3 1019 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 RAB42Q8N4Z0 105 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 ABHD8Q96I13 439 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 POLR3CQ9BUI4 534 aaPredicted RBP11.78□□□□□ -0.52
TRIM41-209ENST00000515834 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 EXOC4Q96A65 974 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 GSDMAQ96QA5 445 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 HEMGNQ9BXL5 484 aa11.78□□□□□ -0.52
TRIM41-209ENST00000515834 PGRMC1O00264 195 aaKnown RBP11.78□□□□□ -0.52
TRIM41-209ENST00000515834 SH2B2O14492 632 aaPredicted RBP11.78□□□□□ -0.52
TRIM41-209ENST00000515834 ZSCAN9O15535 394 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms