RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 SH2D3AQ9BRG2 576 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 FTHL17Q9BXU8 183 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 CYP26B1Q9NR63 512 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 WRAP73Q9P2S5 460 aaPredicted RBP21.71■■□□□ 1.07
LMNA-225ENST00000515824 PADI3Q9ULW8 664 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 PPME1Q9Y570 386 aa21.71■■□□□ 1.07
LMNA-225ENST00000515824 MAFO75444 373 aaPredicted RBP21.7■■□□□ 1.06
LMNA-225ENST00000515824 RPS6KA5O75582 802 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 CA3P07451 260 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 TECP42680 631 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 TOB1P50616 345 aaPredicted RBP21.7■■□□□ 1.06
LMNA-225ENST00000515824 NLRP11P59045 1033 aaKnown RBP21.7■■□□□ 1.06
LMNA-225ENST00000515824 CDC42EP1Q00587 391 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 GRIN2CQ14957 1233 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 KIZQ2M2Z5 673 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 PLA2G4FQ68DD2 849 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 FAM117BQ6P1L5 589 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 TOP1MTQ969P6 601 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 CEP89Q96ST8 783 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 PPP1R16BQ96T49 567 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 CDHR5Q9HBB8 845 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 STXBP5LQ9Y2K9 1186 aa21.7■■□□□ 1.06
LMNA-225ENST00000515824 WDR81Q562E7 1941 aa21.69■■□□□ 1.06
LMNA-225ENST00000515824 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.69■■□□□ 1.06
LMNA-225ENST00000515824 ENPP3O14638 875 aa21.69■■□□□ 1.06
LMNA-225ENST00000515824 GPR182O15218 404 aa21.69■■□□□ 1.06
LMNA-225ENST00000515824 GPR32O75388 356 aa21.69■■□□□ 1.06
LMNA-225ENST00000515824 NFX1Q12986 1120 aaKnown RBP21.69■■□□□ 1.06
LMNA-225ENST00000515824 NBR1Q14596 966 aa21.69■■□□□ 1.06
LMNA-225ENST00000515824 RILPL1Q5EBL4 403 aa21.69■■□□□ 1.06
LMNA-225ENST00000515824 OSMRQ99650 979 aa21.69■■□□□ 1.06
LMNA-225ENST00000515824 IGKV6-21A0A0C4DH24 114 aa21.68■■□□□ 1.06
LMNA-225ENST00000515824 POTEMA6NI47 508 aa21.68■■□□□ 1.06
LMNA-225ENST00000515824 K7ELQ4 463 aaPredicted RBP21.68■■□□□ 1.06
LMNA-225ENST00000515824 LYPLA2O95372 231 aa21.68■■□□□ 1.06
LMNA-225ENST00000515824 PDCP20941 246 aa21.68■■□□□ 1.06
LMNA-225ENST00000515824 NPEPPSP55786 919 aa21.68■■□□□ 1.06
LMNA-225ENST00000515824 TMEM266Q2M3C6 531 aa21.68■■□□□ 1.06
LMNA-225ENST00000515824 C4orf32Q8N8J7 132 aa21.68■■□□□ 1.06
LMNA-225ENST00000515824 SLC7A3Q8WY07 619 aa21.68■■□□□ 1.06
LMNA-225ENST00000515824 INTS4Q96HW7 963 aaKnown RBP21.68■■□□□ 1.06
LMNA-225ENST00000515824 NOC2LQ9Y3T9 749 aaKnown RBP21.68■■□□□ 1.06
LMNA-225ENST00000515824 INSL6Q9Y581 213 aa21.68■■□□□ 1.06
LMNA-225ENST00000515824 PCDHB6Q9Y5E3 794 aa21.68■■□□□ 1.06
LMNA-225ENST00000515824 EVPLQ92817 2033 aa21.68■■□□□ 1.06
LMNA-225ENST00000515824 UPP2O95045 317 aa21.67■■□□□ 1.06
LMNA-225ENST00000515824 RFC5P40937 340 aa21.67■■□□□ 1.06
LMNA-225ENST00000515824 PTGDRQ13258 359 aa21.67■■□□□ 1.06
LMNA-225ENST00000515824 XKR9Q5GH70 373 aa21.67■■□□□ 1.06
LMNA-225ENST00000515824 TMEM40Q8WWA1 233 aa21.67■■□□□ 1.06
LMNA-225ENST00000515824 SCLT1Q96NL6 688 aa21.67■■□□□ 1.06
LMNA-225ENST00000515824 ADAMTS10Q9H324 1103 aa21.67■■□□□ 1.06
LMNA-225ENST00000515824 SUCLA2Q9P2R7 463 aaPredicted RBP21.67■■□□□ 1.06
LMNA-225ENST00000515824 ST3GAL5Q9UNP4 418 aa21.67■■□□□ 1.06
LMNA-225ENST00000515824 LAD1O00515 517 aa21.66■■□□□ 1.06
LMNA-225ENST00000515824 GPC3P51654 580 aa21.66■■□□□ 1.06
LMNA-225ENST00000515824 POLGP54098 1239 aaPredicted RBP21.66■■□□□ 1.06
LMNA-225ENST00000515824 ERMNQ8TAM6 284 aa21.66■■□□□ 1.06
LMNA-225ENST00000515824 NLRP7Q8WX94 980 aa21.66■■□□□ 1.06
LMNA-225ENST00000515824 MYLIPQ8WY64 445 aa21.66■■□□□ 1.06
LMNA-225ENST00000515824 SNX21Q969T3 373 aa21.66■■□□□ 1.06
LMNA-225ENST00000515824 ERVK-5Q9HDB9 667 aa21.66■■□□□ 1.06
LMNA-225ENST00000515824 TUFT1Q9NNX1 390 aa21.66■■□□□ 1.06
LMNA-225ENST00000515824 ANKEF1Q9NU02 776 aa21.66■■□□□ 1.06
LMNA-225ENST00000515824 ZBTB39O15060 712 aa21.65■■□□□ 1.06
LMNA-225ENST00000515824 XRCC6P12956 609 aaKnown RBP eCLIP21.65■■□□□ 1.06
LMNA-225ENST00000515824 EIF4BP23588 611 aaKnown RBP21.65■■□□□ 1.06
LMNA-225ENST00000515824 FXR2P51116 673 aaKnown RBP eCLIP21.65■■□□□ 1.065e-9■□□□□ 11
LMNA-225ENST00000515824 HTRA4P83105 476 aaPredicted RBP21.65■■□□□ 1.06
LMNA-225ENST00000515824 TAP1Q03518 808 aa21.65■■□□□ 1.06
LMNA-225ENST00000515824 DRP2Q13474 957 aa21.65■■□□□ 1.06
LMNA-225ENST00000515824 ZNF579Q8NAF0 562 aaKnown RBP21.65■■□□□ 1.06
LMNA-225ENST00000515824 CCDC43Q96MW1 224 aaKnown RBP21.65■■□□□ 1.06
LMNA-225ENST00000515824 YME1L1Q96TA2 773 aa21.65■■□□□ 1.06
LMNA-225ENST00000515824 GAS2L1Q99501 681 aaPredicted RBP21.65■■□□□ 1.06
LMNA-225ENST00000515824 POLR3CQ9BUI4 534 aaPredicted RBP21.65■■□□□ 1.06
LMNA-225ENST00000515824 RAB34Q9BZG1 259 aa21.65■■□□□ 1.06
LMNA-225ENST00000515824 TSPYL2Q9H2G4 693 aaPredicted RBP21.65■■□□□ 1.06
LMNA-225ENST00000515824 PRDM12Q9H4Q4 367 aa21.65■■□□□ 1.06
LMNA-225ENST00000515824 DHX33Q9H6R0 707 aaKnown RBP21.65■■□□□ 1.06
LMNA-225ENST00000515824 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.65■■□□□ 1.06
LMNA-225ENST00000515824 MICAL3Q7RTP6 2002 aa21.65■■□□□ 1.06
LMNA-225ENST00000515824 CDH23Q9H251 3354 aa21.64■■□□□ 1.06
LMNA-225ENST00000515824 LCHNA4D1U4 455 aa21.64■■□□□ 1.05
LMNA-225ENST00000515824 GAS2O43903 313 aaKnown RBP21.64■■□□□ 1.05
LMNA-225ENST00000515824 FOSL2P15408 326 aa21.64■■□□□ 1.05
LMNA-225ENST00000515824 PDIA5Q14554 519 aa21.64■■□□□ 1.05
LMNA-225ENST00000515824 RTN4RL1Q86UN2 441 aaPredicted RBP21.64■■□□□ 1.05
LMNA-225ENST00000515824 FAM228AQ86W67 206 aa21.64■■□□□ 1.05
LMNA-225ENST00000515824 CATSPER3Q86XQ3 398 aa21.64■■□□□ 1.05
LMNA-225ENST00000515824 RHPN2Q8IUC4 686 aa21.64■■□□□ 1.05
LMNA-225ENST00000515824 ZNF668Q96K58 619 aaPredicted RBP21.64■■□□□ 1.05
LMNA-225ENST00000515824 GCOM2Q9BZD3 368 aaPredicted RBP21.64■■□□□ 1.05
LMNA-225ENST00000515824 TMX1Q9H3N1 280 aa21.64■■□□□ 1.05
LMNA-225ENST00000515824 STK24Q9Y6E0 443 aa21.64■■□□□ 1.05
LMNA-225ENST00000515824 GBF1Q92538 1859 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 SPATA31C1P0DKV0 1188 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 RPA1P27694 616 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 HAUS3Q68CZ6 603 aa21.63■■□□□ 1.05
LMNA-225ENST00000515824 DTHD1Q6ZMT9 781 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms