RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 C2orf69Q8N8R5 385 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 CHST13Q8NET6 341 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 NUDT10Q8NFP7 164 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 SLC7A14Q8TBB6 771 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 NUDT11Q96G61 164 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 LOXL4Q96JB6 756 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 RBM15Q96T37 977 aaKnown RBP eCLIP4.97□□□□□ -1.616e-8■□□□□ 8.8
CAST-242ENST00000515063 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 PRKRIP1Q9H875 184 aaPredicted RBP4.97□□□□□ -1.61
CAST-242ENST00000515063 SLC39A2Q9NP94 309 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 KCNH7Q9NS40 1196 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 COQ6Q9Y2Z9 468 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 IQGAP3Q86VI3 1631 aa4.97□□□□□ -1.61
CAST-242ENST00000515063 MAGI2Q86UL8 1455 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 NUP155O75694 1391 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 KIF15Q9NS87 1388 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 SCDO00767 359 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 B4GALT4O60513 344 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 C4BPAP04003 597 aaKnown RBP4.96□□□□□ -1.62
CAST-242ENST00000515063 POLD1P28340 1107 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 IGFALSP35858 605 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 FLT3P36888 993 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 MAGEA10P43363 369 aaPredicted RBP4.96□□□□□ -1.62
CAST-242ENST00000515063 USP10Q14694 798 aaKnown RBP4.96□□□□□ -1.62
CAST-242ENST00000515063 ARHGAP44Q17R89 818 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 WDR72Q3MJ13 1102 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 ZMAT1Q5H9K5 638 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 PHF19Q5T6S3 580 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 CIR1Q86X95 450 aaPredicted RBP4.96□□□□□ -1.62
CAST-242ENST00000515063 LILRB2Q8N423 598 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 CARD11Q9BXL7 1154 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 KATNBL1Q9H079 304 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 SEC61A2Q9H9S3 476 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 GALNT8Q9NY28 637 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.96□□□□□ -1.62
CAST-242ENST00000515063 DUOX2Q9NRD8 1548 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 FAM135AQ9P2D6 1515 aa4.96□□□□□ -1.62
CAST-242ENST00000515063 BCORL1Q5H9F3 1711 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 USP47Q96K76 1375 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 TRPM1Q7Z4N2 1603 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 EIF2AK4Q9P2K8 1649 aaKnown RBP4.95□□□□□ -1.62
CAST-242ENST00000515063 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.95□□□□□ -1.62
CAST-242ENST00000515063 FOXP2O15409 715 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 TMEM177Q53S58 311 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 NOSTRINQ8IVI9 506 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 IGSF22Q8N9C0 903 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 CALML6Q8TD86 181 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 SCLYQ96I15 445 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 SCYL1Q96KG9 808 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 GPR20Q99678 358 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 BOCQ9BWV1 1114 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 BTBD2Q9BX70 525 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 TRIM39Q9HCM9 518 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 CABP5Q9NP86 173 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 ASB1Q9Y576 335 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 SLC4A7Q9Y6M7 1214 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 CLASP1Q7Z460 1538 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 ERBINQ96RT1 1412 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 E9PCH4 1651 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 KIF7Q2M1P5 1343 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 ZBED9Q6R2W3 1325 aa4.95□□□□□ -1.62
CAST-242ENST00000515063 GPRASP1Q5JY77 1395 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 ESYT3A0FGR9 886 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 IL18BPO95998 194 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 ASLP04424 464 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 SDHAP31040 664 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 CSF2RBP32927 897 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 ETV4P43268 484 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 IRF9Q00978 393 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 CPZQ66K79 652 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 ZCCHC8Q6NZY4 707 aaKnown RBP4.94□□□□□ -1.62
CAST-242ENST00000515063 OVCH1Q7RTY7 1134 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 HIPK4Q8NE63 616 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 E2F7Q96AV8 911 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 WNK4Q96J92 1243 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 CDK5RAP1Q96SZ6 601 aaKnown RBP4.94□□□□□ -1.62
CAST-242ENST00000515063 PPP4R1LQ9P1A2 415 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 BTBD7Q9P203 1132 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 B3GALT1Q9Y5Z6 326 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 RTEL1-TNFRSF6BF6WH68 1400 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 PLCH2O75038 1416 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 TTC37Q6PGP7 1564 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 NEURL4Q96JN8 1562 aa4.94□□□□□ -1.62
CAST-242ENST00000515063 ZCCHC11Q5TAX3 1644 aaKnown RBP4.94□□□□□ -1.62
CAST-242ENST00000515063 INSRP06213 1382 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 DHX29Q7Z478 1369 aaKnown RBP4.93□□□□□ -1.62
CAST-242ENST00000515063 ARHGAP5Q13017 1502 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 SYCP2Q9BX26 1530 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 KCNK3O14649 394 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 OPA1O60313 960 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 RAPGEF3O95398 923 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 ECE1P42892 770 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 ADAM17P78536 824 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 MAP3K12Q12852 859 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 TOP3AQ13472 1001 aaPredicted RBP4.93□□□□□ -1.62
CAST-242ENST00000515063 TMEM132BQ14DG7 1078 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 CCDC144BQ3MJ40 725 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 UBE2R2Q712K3 238 aaPredicted RBP4.93□□□□□ -1.62
CAST-242ENST00000515063 OTOP1Q7RTM1 612 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 OTOP2Q7RTS6 562 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms