RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	TMEM40	Q8WWA1	233 aa		7.85	□□□□□ -1.15
HIPK1-210	ENST00000514621	CDCA5	Q96FF9	252 aa		7.85	□□□□□ -1.15
HIPK1-210	ENST00000514621	ALPK1	Q96QP1	1244 aa		7.85	□□□□□ -1.15
HIPK1-210	ENST00000514621	CNTNAP1	P78357	1384 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	TCRBV5S4A2T	A0A5A2	114 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	MEIS3P2	A8K0S8	358 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	WDHD1	O75717	1129 aa	Predicted RBP	7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	CELF2	O95319	508 aa	Known RBP	7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	ESR1	P03372	595 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	CHGB	P05060	677 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	GDNF	P39905	211 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	AFM	P43652	599 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	DYNLL1	P63167	89 aa	Known RBP	7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	RACK1	P63244	317 aa	Known RBP	7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	TNFAIP1	Q13829	316 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	TMED8	Q6PL24	325 aa	Predicted RBP	7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	ZNF654	Q8IZM8	581 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	KBTBD3	Q8NAB2	608 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	VWCE	Q96DN2	955 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	IDI2	Q9BXS1	227 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	ZNF408	Q9H9D4	720 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	AATF	Q9NY61	560 aa	Known RBP eCLIP	7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	TMOD2	Q9NZR1	351 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	DUSP13	Q9UII6	198 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	PPP2R3B	Q9Y5P8	575 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	MAST2	Q6P0Q8	1798 aa		7.84	□□□□□ -1.15
HIPK1-210	ENST00000514621	ZNF532	Q9HCE3	1301 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	POLR2A	P24928	1970 aa	Known RBP	7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	WASH4P	A8MWX3	477 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	BAG3	O95817	575 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	NME1	P15531	152 aa	Known RBP	7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	ADD2	P35612	726 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	HTRA3	P83110	453 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	TCP10	Q12799	353 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	CLEC16A	Q2KHT3	1053 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	BMP2KL	Q5H9B9	411 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	FAM83A	Q86UY5	434 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	ZFPM1	Q8IX07	1006 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	TEX11	Q8IYF3	940 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	MIGA1	Q8NAN2	632 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	FAM151A	Q8WW52	585 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	TEPSIN	Q96N21	525 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	RIOK1	Q9BRS2	568 aa	Known RBP	7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	NOL10	Q9BSC4	688 aa	Known RBP	7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	TMEM39B	Q9GZU3	492 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	SLAMF8	Q9P0V8	285 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	RFX7	Q2KHR2	1363 aa		7.83	□□□□□ -1.16
HIPK1-210	ENST00000514621	MYH2	Q9UKX2	1941 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	RNF113A	O15541	343 aa	Known RBP	7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	ENTPD3	O75355	529 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	CLEC3A	O75596	197 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	SDS	P20132	328 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	PICALM	Q13492	652 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	UBE3C	Q15386	1083 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	SUPT20HL1	Q3ZLR7	823 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	ZSCAN25	Q6NSZ9	544 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	METTL16	Q86W50	562 aa	Known RBP	7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	ZSWIM9	Q86XI8	627 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	ENOX1	Q8TC92	643 aa	Known RBP	7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	RILPL2	Q969X0	211 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	EVI5L	Q96CN4	794 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	FERD3L	Q96RJ6	166 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	GBA2	Q9HCG7	927 aa	Predicted RBP	7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	DDX4	Q9NQI0	724 aa	Known RBP	7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	C19orf73	Q9NVV2	129 aa		7.82	□□□□□ -1.16
HIPK1-210	ENST00000514621	SSC5D	A1L4H1	1573 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	ECM29	Q5VYK3	1845 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	UBE2Q2L	H0YL09	131 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	TNFRSF10C	O14798	259 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	CDC45	O75419	566 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	POLR2B	P30876	1174 aa	Known RBP	7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	NF2	P35240	595 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	FKBP1B	P68106	108 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	EGR3	Q06889	387 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	PRKG1	Q13976	671 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	MOB2	Q70IA6	237 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	TTC6	Q86TZ1	520 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	SAPCD2	Q86UD0	394 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	MAPKAPK5	Q8IW41	473 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	LCORL	Q8N3X6	602 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	C2orf69	Q8N8R5	385 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	TGFBRAP1	Q8WUH2	860 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	SPATA32	Q96LK8	384 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	FSD1	Q9BTV5	496 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	PUS7L	Q9H0K6	701 aa	Known RBP	7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	ARMT1	Q9H993	441 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	TMEM59L	Q9UK28	342 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	ABT1	Q9ULW3	272 aa	Known RBP	7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	FZD1	Q9UP38	647 aa		7.81	□□□□□ -1.16
HIPK1-210	ENST00000514621	DDTL	A6NHG4	134 aa	Predicted RBP	7.8	□□□□□ -1.16
HIPK1-210	ENST00000514621	RASSF10	A6NK89	507 aa		7.8	□□□□□ -1.16
HIPK1-210	ENST00000514621	USP2	O75604	605 aa	Predicted RBP	7.8	□□□□□ -1.16
HIPK1-210	ENST00000514621	MBD4	O95243	580 aa		7.8	□□□□□ -1.16
HIPK1-210	ENST00000514621	C8A	P07357	584 aa		7.8	□□□□□ -1.16
HIPK1-210	ENST00000514621	ZFY	P08048	801 aa	Predicted RBP	7.8	□□□□□ -1.16
HIPK1-210	ENST00000514621	RAC2	P15153	192 aa		7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms