RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 BANK1Q8NDB2 785 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 ENGASEQ8NFI3 743 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 NEK9Q8TD19 979 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 TRAPPC12Q8WVT3 735 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 DNAJB3Q8WWF6 145 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 HERVK_113Q902F9 699 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 VWCEQ96DN2 955 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 DYDC2Q96IM9 177 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 PPP1R9BQ96SB3 815 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 EIF2AK1Q9BQI3 630 aaKnown RBP9.3□□□□□ -0.92
CCL28-204ENST00000514421 RBSNQ9H1K0 784 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 TSPY26PQ9H489 355 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 CLSTN2Q9H4D0 955 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 RGL1Q9NZL6 768 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 NBNO60934 754 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 PPP6R2O75170 966 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 LYPLA2O95372 231 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 CHRNA1P02708 482 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 ACTN1P12814 892 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 PRPHP41219 470 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 CDC42EP1Q00587 391 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 SNW1Q13573 536 aaKnown RBP9.29□□□□□ -0.92
CCL28-204ENST00000514421 CTTNQ14247 550 aaKnown RBP9.29□□□□□ -0.92
CCL28-204ENST00000514421 PTPAQ15257 358 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 TMEM266Q2M3C6 531 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 UVSSAQ2YD98 709 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 EFCAB12Q6NXP0 572 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 DTHD1Q6ZMT9 781 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 ANO5Q75V66 913 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 METTL13Q8N6R0 699 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 ERMNQ8TAM6 284 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 ZBTB10Q96DT7 871 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 PDLIM2Q96JY6 352 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 POLR3CQ9BUI4 534 aaPredicted RBP9.29□□□□□ -0.92
CCL28-204ENST00000514421 PANK2Q9BZ23 570 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 RAB34Q9BZG1 259 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 FAM49AQ9H0Q0 323 aaPredicted RBP9.29□□□□□ -0.92
CCL28-204ENST00000514421 MTIF3Q9H2K0 278 aaKnown RBP9.29□□□□□ -0.92
CCL28-204ENST00000514421 LRWD1Q9UFC0 647 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 PPME1Q9Y570 386 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 SQORQ9Y6N5 450 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 KAT6AQ92794 2004 aa9.29□□□□□ -0.92
CCL28-204ENST00000514421 IGKV6-21A0A0C4DH24 114 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 GOLGA6L4A6NEF3 574 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 M0QZ92 97 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 MAFO75444 373 aaPredicted RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 C22orf31O95567 290 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 BMP15O95972 392 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 CTSHP09668 335 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 MUTP22033 750 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 RPA1P27694 616 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 YWHABP31946 246 aaKnown RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 DNM2P50570 870 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 MRPS6P82932 125 aaKnown RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 ATP2C1P98194 919 aaPredicted RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 CYP4A11Q02928 519 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 FAM160A1Q05DH4 1040 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 MGAT3Q09327 533 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 TBC1D8BQ0IIM8 1120 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 IKBKEQ14164 716 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 MBTPS1Q14703 1052 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 MTERF2Q49AM1 385 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 AXDND1Q5T1B0 1012 aaPredicted RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 RASIP1Q5U651 963 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 ARL6IP4Q66PJ3 421 aaKnown RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 CNKSR3Q6P9H4 555 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 FAM43BQ6ZT52 329 aaPredicted RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 OTOP2Q7RTS6 562 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 FMR1NBQ8N0W7 255 aaPredicted RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 DBF4BQ8NFT6 615 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 SEPT8Q92599 483 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 CEP170P1Q96L14 293 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 RNPC3Q96LT9 517 aaKnown RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 NACC1Q96RE7 527 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 CEP89Q96ST8 783 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 JPH2Q9BR39 696 aaPredicted RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 LXNQ9BS40 222 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 CELF4Q9BZC1 486 aaKnown RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 NUP62CLQ9H1M0 184 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 SUGCTQ9HAC7 445 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 TUFT1Q9NNX1 390 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 CYP26B1Q9NR63 512 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 ANKEF1Q9NU02 776 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 DACT1Q9NYF0 836 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 WRAP73Q9P2S5 460 aaPredicted RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 SEPT9Q9UHD8 586 aaPredicted RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 PCDHA7Q9UN72 937 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 CDY2AQ9Y6F7 541 aa9.28□□□□□ -0.92
CCL28-204ENST00000514421 RANBP2P49792 3224 aaKnown RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 TRIP12Q14669 1992 aaPredicted RBP9.28□□□□□ -0.92
CCL28-204ENST00000514421 ABHD14A-ACY1A0A1B0GW23 586 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 POTEMA6NI47 508 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 ZBTB39O15060 712 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 SPTLC2O15270 562 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 EFCAB14O75071 495 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 NR1I2O75469 434 aa9.27□□□□□ -0.93
CCL28-204ENST00000514421 CAVIN2O95810 425 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms