RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 NR1I3Q14994 352 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 CDKAL1Q5VV42 579 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 MIS18BP1Q6P0N0 1132 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 TRAF7Q6Q0C0 670 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 ABHD15Q6UXT9 468 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 DYMQ7RTS9 669 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 GPBP1Q86WP2 473 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 MYOCDQ8IZQ8 938 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 ZNF507Q8TCN5 953 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 TMEM174Q8WUU8 243 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 NELFBQ8WX92 580 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 P2RX5Q93086 422 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 MED15Q96RN5 788 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 PTPN18Q99952 460 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 NTPCRQ9BSD7 190 aaKnown RBP10.95□□□□□ -0.66
TPM3-221ENST00000513769 MCOLN1Q9GZU1 580 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 JPH1Q9HDC5 661 aaPredicted RBP10.95□□□□□ -0.66
TPM3-221ENST00000513769 PCDHA2Q9Y5H9 948 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 IVNS1ABPQ9Y6Y0 642 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 OTOFQ9HC10 1997 aa10.95□□□□□ -0.66
TPM3-221ENST00000513769 IGKV6D-21A0A0A0MT36 114 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 SLC15A5A6NIM6 579 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 AP5Z1O43299 807 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 GNA14O95837 355 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 ALDH1A1P00352 501 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 CYP2C8P10632 490 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 SLC26A2P50443 739 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 ZNF131P52739 623 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 GSDMDP57764 484 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 FKBP3Q00688 224 aaKnown RBP10.94□□□□□ -0.66
TPM3-221ENST00000513769 SREBF2Q12772 1141 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 ALCAMQ13740 583 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 ZNF792Q3KQV3 632 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 FAM26FQ5R3K3 315 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 SEPT1Q8WYJ6 367 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 PURBQ96QR8 312 aaKnown RBP10.94□□□□□ -0.66
TPM3-221ENST00000513769 TSG101Q99816 390 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 LXNQ9BS40 222 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 NRBP2Q9NSY0 501 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 LARSQ9P2J5 1176 aaKnown RBP10.94□□□□□ -0.66
TPM3-221ENST00000513769 LIMA1Q9UHB6 759 aaKnown RBP10.94□□□□□ -0.66
TPM3-221ENST00000513769 DDX41Q9UJV9 622 aaKnown RBP10.94□□□□□ -0.66
TPM3-221ENST00000513769 MAFBQ9Y5Q3 323 aaPredicted RBP10.94□□□□□ -0.66
TPM3-221ENST00000513769 A0A0G2JMZ2 1700 aa10.94□□□□□ -0.66
TPM3-221ENST00000513769 TRPM7Q96QT4 1865 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 RBM47A0AV96 593 aaKnown RBP10.93□□□□□ -0.66
TPM3-221ENST00000513769 ARHGEF35A5YM69 484 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 PDXKO00764 312 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 EIF3DO15371 548 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM3-221ENST00000513769 SSBP05455 408 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM3-221ENST00000513769 TPM2P07951 284 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 YWHABP31946 246 aaKnown RBP10.93□□□□□ -0.66
TPM3-221ENST00000513769 RTP1P59025 263 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 CYP4A11Q02928 519 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 COASYQ13057 564 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 MYBPC2Q14324 1141 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 EDRF1Q3B7T1 1238 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 XKR3Q5GH77 459 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 TTI2Q6NXR4 508 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 METTL7BQ6UX53 244 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 LIAT1Q6ZQX7 453 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 PLEKHH3Q7Z736 793 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 FILIP1Q7Z7B0 1213 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 DRC7Q8IY82 874 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 FAM43AQ8N2R8 423 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 ANKRD13CQ8N6S4 541 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 KCNN1Q92952 543 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 NIFKQ9BYG3 293 aaKnown RBP10.93□□□□□ -0.66
TPM3-221ENST00000513769 ST6GALNAC4Q9H4F1 302 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 PARVGQ9HBI0 331 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 ZFYVE28Q9HCC9 887 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 SLC39A2Q9NP94 309 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 CGNQ9P2M7 1197 aaKnown RBP10.93□□□□□ -0.66
TPM3-221ENST00000513769 MAGEC2Q9UBF1 373 aaPredicted RBP10.93□□□□□ -0.66
TPM3-221ENST00000513769 TRAF3IP3Q9Y228 551 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 GDAQ9Y2T3 454 aa10.93□□□□□ -0.66
TPM3-221ENST00000513769 A0A087WWV3 80 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 A0A1B0GTH6 734 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 CHMP2AO43633 222 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 TLR2O60603 784 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 CCNE2O96020 404 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 PTMAP06454 111 aaKnown RBP10.92□□□□□ -0.66
TPM3-221ENST00000513769 RPL13P26373 211 aaKnown RBP10.92□□□□□ -0.66
TPM3-221ENST00000513769 RARRES1P49788 294 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 ACTR2P61160 394 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 NOGQ13253 232 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 LAMC2Q13753 1193 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 TTLL4Q14679 1199 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 NFIL3Q16649 462 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 KNOP1Q1ED39 458 aaKnown RBP10.92□□□□□ -0.66
TPM3-221ENST00000513769 BMT2Q1RMZ1 405 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 TCP11X2Q5H9J9 407 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 ANKRD40Q6AI12 368 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 IQSEC1Q6DN90 963 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 KLHL10Q6JEL2 608 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 SWSAP1Q6NVH7 229 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 CCDC62Q6P9F0 684 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 TRIM67Q6ZTA4 783 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 SEPT14Q6ZU15 432 aa10.92□□□□□ -0.66
TPM3-221ENST00000513769 EPM2AIP1Q7L775 607 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms